Gene : Phvul.004G046700 P. vulgaris v2.1
Defline:  (1 of 4) K02940 - large subunit ribosomal protein L9e (RP-L9e, RPL9) Genomic Order:  501
Name:  ? Phvul.004G046700 Secondary Identifier:  ? PAC:37162905
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G046700 0.5kb upstream 0.5kb upstream 2372 true Chr04: 5655464-5657835 Phaseolus vulgaris
Phvul.004G046700 0.5kb upstream 0.5kb upstream 500 false Chr04: 5657336-5657835 Phaseolus vulgaris
Phvul.004G046700 0.5kb downstream 0.5kb downstream 2372 true Chr04: 5654964-5657335 Phaseolus vulgaris
Phvul.004G046700 0.5kb downstream 0.5kb downstream 500 false Chr04: 5654964-5655463 Phaseolus vulgaris
Phvul.004G046700 1.0kb upstream 1.0kb upstream 2872 true Chr04: 5655464-5658335 Phaseolus vulgaris
Phvul.004G046700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5657336-5658335 Phaseolus vulgaris
Phvul.004G046700 1.0kb downstream 1.0kb downstream 2872 true Chr04: 5654464-5657335 Phaseolus vulgaris
Phvul.004G046700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5654464-5655463 Phaseolus vulgaris
Phvul.004G046700 2.0kb upstream 2.0kb upstream 3872 true Chr04: 5655464-5659335 Phaseolus vulgaris
Phvul.004G046700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5657336-5659335 Phaseolus vulgaris
Phvul.004G046700 2.0kb downstream 2.0kb downstream 3872 true Chr04: 5653464-5657335 Phaseolus vulgaris
Phvul.004G046700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5653464-5655463 Phaseolus vulgaris
Phvul.004G046700 5.0kb upstream 5.0kb upstream 6872 true Chr04: 5655464-5662335 Phaseolus vulgaris
Phvul.004G046700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5657336-5662335 Phaseolus vulgaris
Phvul.004G046700 5.0kb downstream 5.0kb downstream 6872 true Chr04: 5650464-5657335 Phaseolus vulgaris
Phvul.004G046700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5650464-5655463 Phaseolus vulgaris
Phvul.004G046700 10.0kb upstream 10.0kb upstream 11872 true Chr04: 5655464-5667335 Phaseolus vulgaris
Phvul.004G046700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5657336-5667335 Phaseolus vulgaris
Phvul.004G046700 10.0kb downstream 10.0kb downstream 11872 true Chr04: 5645464-5657335 Phaseolus vulgaris
Phvul.004G046700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5645464-5655463 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311013 5265 Fabidae View MSA
124074174 5270 Rosid View MSA
123746970 5271 Pentapetalae View MSA
122791041 5272 Eudicot View MSA
122049178 5273 Angiosperm View MSA
121350412 5274 Embryophyte View MSA
123424125 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 128.992 0.0 344.21 High  
cufflinks 163.975 0.0 446.366 High  
cufflinks 94.3687 0.0 246.541 High  
cufflinks 225.377 0.0 631.157 High High
cufflinks 153.677 0.0 413.878 High  
cufflinks 84.2861 0.0 219.253 High Low
cufflinks 114.218 0.0 302.23 High  
cufflinks 140.055 0.0 376.082 High  
cufflinks 148.309 0.0 400.638 High  
cufflinks 55.3978 0.0 143.199 High Low
cufflinks 157.14 0.0 425.929 High  

0 Strain