Gene : Phvul.004G047500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23076//PTHR23076:SF61 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED Genomic Order:  509
Name:  ? Phvul.004G047500 Secondary Identifier:  ? PAC:37162879
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G047500 0.5kb upstream 0.5kb upstream 6054 true Chr04: 5750189-5756242 Phaseolus vulgaris
Phvul.004G047500 0.5kb upstream 0.5kb upstream 500 false Chr04: 5750189-5750688 Phaseolus vulgaris
Phvul.004G047500 0.5kb downstream 0.5kb downstream 6054 true Chr04: 5750689-5756742 Phaseolus vulgaris
Phvul.004G047500 0.5kb downstream 0.5kb downstream 500 false Chr04: 5756243-5756742 Phaseolus vulgaris
Phvul.004G047500 1.0kb upstream 1.0kb upstream 6554 true Chr04: 5749689-5756242 Phaseolus vulgaris
Phvul.004G047500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5749689-5750688 Phaseolus vulgaris
Phvul.004G047500 1.0kb downstream 1.0kb downstream 6554 true Chr04: 5750689-5757242 Phaseolus vulgaris
Phvul.004G047500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5756243-5757242 Phaseolus vulgaris
Phvul.004G047500 2.0kb upstream 2.0kb upstream 7554 true Chr04: 5748689-5756242 Phaseolus vulgaris
Phvul.004G047500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5748689-5750688 Phaseolus vulgaris
Phvul.004G047500 2.0kb downstream 2.0kb downstream 7554 true Chr04: 5750689-5758242 Phaseolus vulgaris
Phvul.004G047500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5756243-5758242 Phaseolus vulgaris
Phvul.004G047500 5.0kb upstream 5.0kb upstream 10554 true Chr04: 5745689-5756242 Phaseolus vulgaris
Phvul.004G047500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5745689-5750688 Phaseolus vulgaris
Phvul.004G047500 5.0kb downstream 5.0kb downstream 10554 true Chr04: 5750689-5761242 Phaseolus vulgaris
Phvul.004G047500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5756243-5761242 Phaseolus vulgaris
Phvul.004G047500 10.0kb upstream 10.0kb upstream 15554 true Chr04: 5740689-5756242 Phaseolus vulgaris
Phvul.004G047500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5740689-5750688 Phaseolus vulgaris
Phvul.004G047500 10.0kb downstream 10.0kb downstream 15554 true Chr04: 5750689-5766242 Phaseolus vulgaris
Phvul.004G047500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5756243-5766242 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308691 5265 Fabidae View MSA
124063018 5270 Rosid View MSA
123737747 5271 Pentapetalae View MSA
122793170 5272 Eudicot View MSA
122045675 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344954 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.50858 0.0 17.6505    
cufflinks 5.673 0.0 15.5969    
cufflinks 17.198 0.0 44.4598   High
cufflinks 4.17371 0.0 11.9284    
cufflinks 5.41301 0.0 15.0343    
cufflinks 11.9199 0.0 31.0767   High
cufflinks 2.18355 0.0 6.61585   Low
cufflinks 3.65868 0.0 10.4158    
cufflinks 1.77699 0.0 5.53892   Low
cufflinks 5.98345 0.0 16.3842    
cufflinks 4.05381 0.0 11.5364    

0 Strain