Gene : Phvul.004G029300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10994:SF67 - RETICULON-LIKE PROTEIN B16 Genomic Order:  331
Name:  ? Phvul.004G029300 Secondary Identifier:  ? PAC:37161981
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G029300 0.5kb upstream 0.5kb upstream 2880 true Chr04: 3493695-3496574 Phaseolus vulgaris
Phvul.004G029300 0.5kb upstream 0.5kb upstream 500 false Chr04: 3496075-3496574 Phaseolus vulgaris
Phvul.004G029300 0.5kb downstream 0.5kb downstream 2880 true Chr04: 3493195-3496074 Phaseolus vulgaris
Phvul.004G029300 0.5kb downstream 0.5kb downstream 500 false Chr04: 3493195-3493694 Phaseolus vulgaris
Phvul.004G029300 1.0kb upstream 1.0kb upstream 3380 true Chr04: 3493695-3497074 Phaseolus vulgaris
Phvul.004G029300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3496075-3497074 Phaseolus vulgaris
Phvul.004G029300 1.0kb downstream 1.0kb downstream 3380 true Chr04: 3492695-3496074 Phaseolus vulgaris
Phvul.004G029300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3492695-3493694 Phaseolus vulgaris
Phvul.004G029300 2.0kb upstream 2.0kb upstream 4380 true Chr04: 3493695-3498074 Phaseolus vulgaris
Phvul.004G029300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3496075-3498074 Phaseolus vulgaris
Phvul.004G029300 2.0kb downstream 2.0kb downstream 4380 true Chr04: 3491695-3496074 Phaseolus vulgaris
Phvul.004G029300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3491695-3493694 Phaseolus vulgaris
Phvul.004G029300 5.0kb upstream 5.0kb upstream 7380 true Chr04: 3493695-3501074 Phaseolus vulgaris
Phvul.004G029300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3496075-3501074 Phaseolus vulgaris
Phvul.004G029300 5.0kb downstream 5.0kb downstream 7380 true Chr04: 3488695-3496074 Phaseolus vulgaris
Phvul.004G029300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3488695-3493694 Phaseolus vulgaris
Phvul.004G029300 10.0kb upstream 10.0kb upstream 12380 true Chr04: 3493695-3506074 Phaseolus vulgaris
Phvul.004G029300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3496075-3506074 Phaseolus vulgaris
Phvul.004G029300 10.0kb downstream 10.0kb downstream 12380 true Chr04: 3483695-3496074 Phaseolus vulgaris
Phvul.004G029300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3483695-3493694 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310328 5265 Fabidae View MSA
124050388 5270 Rosid View MSA
123750522 5271 Pentapetalae View MSA
122793099 5272 Eudicot View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.64446 0.0 31.1741   High
cufflinks 6.36918 0.0 21.6688    
cufflinks 5.53476 0.0 19.017    
cufflinks 5.54635 0.0 19.1595    
cufflinks 5.75408 0.0 19.9527    
cufflinks 5.81189 0.0 19.9614    
cufflinks 6.76235 0.0 22.8532    
cufflinks 4.6877 0.0 16.4019   Low
cufflinks 7.73962 0.0 25.8269   High
cufflinks 6.20827 0.0 21.2143    
cufflinks 4.52182 0.0 16.0461   Low

0 Strain