Gene : Phvul.004G027900 P. vulgaris v2.1
Defline:  (1 of 2) K03869 - cullin 3 (CUL3) Genomic Order:  315
Name:  ? Phvul.004G027900 Secondary Identifier:  ? PAC:37162501
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G027900 0.5kb upstream 0.5kb upstream 5033 true Chr04: 3229237-3234269 Phaseolus vulgaris
Phvul.004G027900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3229237-3229736 Phaseolus vulgaris
Phvul.004G027900 0.5kb downstream 0.5kb downstream 5033 true Chr04: 3229737-3234769 Phaseolus vulgaris
Phvul.004G027900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3234270-3234769 Phaseolus vulgaris
Phvul.004G027900 1.0kb upstream 1.0kb upstream 5533 true Chr04: 3228737-3234269 Phaseolus vulgaris
Phvul.004G027900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3228737-3229736 Phaseolus vulgaris
Phvul.004G027900 1.0kb downstream 1.0kb downstream 5533 true Chr04: 3229737-3235269 Phaseolus vulgaris
Phvul.004G027900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3234270-3235269 Phaseolus vulgaris
Phvul.004G027900 2.0kb upstream 2.0kb upstream 6533 true Chr04: 3227737-3234269 Phaseolus vulgaris
Phvul.004G027900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3227737-3229736 Phaseolus vulgaris
Phvul.004G027900 2.0kb downstream 2.0kb downstream 6533 true Chr04: 3229737-3236269 Phaseolus vulgaris
Phvul.004G027900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3234270-3236269 Phaseolus vulgaris
Phvul.004G027900 5.0kb upstream 5.0kb upstream 9533 true Chr04: 3224737-3234269 Phaseolus vulgaris
Phvul.004G027900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3224737-3229736 Phaseolus vulgaris
Phvul.004G027900 5.0kb downstream 5.0kb downstream 9533 true Chr04: 3229737-3239269 Phaseolus vulgaris
Phvul.004G027900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3234270-3239269 Phaseolus vulgaris
Phvul.004G027900 10.0kb upstream 10.0kb upstream 14533 true Chr04: 3219737-3234269 Phaseolus vulgaris
Phvul.004G027900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3219737-3229736 Phaseolus vulgaris
Phvul.004G027900 10.0kb downstream 10.0kb downstream 14533 true Chr04: 3229737-3244269 Phaseolus vulgaris
Phvul.004G027900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3234270-3244269 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301165 5265 Fabidae View MSA
124069675 5270 Rosid View MSA
123747222 5271 Pentapetalae View MSA
122785909 5272 Eudicot View MSA
122047217 5273 Angiosperm View MSA
121346252 5274 Embryophyte View MSA
123427758 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1047 0.0 33.95   Low
cufflinks 17.2737 0.0 44.6523    
cufflinks 19.8837 0.0 51.4931    
cufflinks 12.5694 0.0 32.6802   Low
cufflinks 19.5882 0.0 50.6531    
cufflinks 22.998 0.0 59.7395    
cufflinks 21.4241 0.0 55.537    
cufflinks 21.598 0.0 56.045    
cufflinks 19.3467 0.0 50.0502    
cufflinks 30.2692 0.0 79.5041   High
cufflinks 20.0232 0.0 51.8015    

0 Strain