Gene : Phvul.004G034100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13169:SF4 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1-RELATED Genomic Order:  376
Name:  ? Phvul.004G034100 Secondary Identifier:  ? PAC:37163514
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G034100 0.5kb upstream 0.5kb upstream 3614 true Chr04: 3979298-3982911 Phaseolus vulgaris
Phvul.004G034100 0.5kb upstream 0.5kb upstream 500 false Chr04: 3982412-3982911 Phaseolus vulgaris
Phvul.004G034100 0.5kb downstream 0.5kb downstream 3614 true Chr04: 3978798-3982411 Phaseolus vulgaris
Phvul.004G034100 0.5kb downstream 0.5kb downstream 500 false Chr04: 3978798-3979297 Phaseolus vulgaris
Phvul.004G034100 1.0kb upstream 1.0kb upstream 4114 true Chr04: 3979298-3983411 Phaseolus vulgaris
Phvul.004G034100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3982412-3983411 Phaseolus vulgaris
Phvul.004G034100 1.0kb downstream 1.0kb downstream 4114 true Chr04: 3978298-3982411 Phaseolus vulgaris
Phvul.004G034100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3978298-3979297 Phaseolus vulgaris
Phvul.004G034100 2.0kb upstream 2.0kb upstream 5114 true Chr04: 3979298-3984411 Phaseolus vulgaris
Phvul.004G034100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3982412-3984411 Phaseolus vulgaris
Phvul.004G034100 2.0kb downstream 2.0kb downstream 5114 true Chr04: 3977298-3982411 Phaseolus vulgaris
Phvul.004G034100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3977298-3979297 Phaseolus vulgaris
Phvul.004G034100 5.0kb upstream 5.0kb upstream 8114 true Chr04: 3979298-3987411 Phaseolus vulgaris
Phvul.004G034100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3982412-3987411 Phaseolus vulgaris
Phvul.004G034100 5.0kb downstream 5.0kb downstream 8114 true Chr04: 3974298-3982411 Phaseolus vulgaris
Phvul.004G034100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3974298-3979297 Phaseolus vulgaris
Phvul.004G034100 10.0kb upstream 10.0kb upstream 13114 true Chr04: 3979298-3992411 Phaseolus vulgaris
Phvul.004G034100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3982412-3992411 Phaseolus vulgaris
Phvul.004G034100 10.0kb downstream 10.0kb downstream 13114 true Chr04: 3969298-3982411 Phaseolus vulgaris
Phvul.004G034100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3969298-3979297 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314619 5265 Fabidae View MSA
124063015 5270 Rosid View MSA
123741686 5271 Pentapetalae View MSA
122788977 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.338 0.0 36.7727    
cufflinks 4.83991 0.0 14.8658   Low
cufflinks 5.15264 0.0 15.6053   Low
cufflinks 7.95704 0.0 23.2686    
cufflinks 13.2427 0.0 36.7374    
cufflinks 4.10671 0.0 12.8461   Low
cufflinks 13.9045 0.0 38.2768    
cufflinks 6.51626 0.0 19.2112    
cufflinks 20.9848 0.0 55.9497   High
cufflinks 9.5043 0.0 27.0636    
cufflinks 11.1238 0.0 31.3753    

0 Strain