Gene : Phvul.004G035000 P. vulgaris v2.1
Defline:  (1 of 3) K02160 - acetyl-CoA carboxylase biotin carboxyl carrier protein (accB, bccP) Genomic Order:  386
Name:  ? Phvul.004G035000 Secondary Identifier:  ? PAC:37163512
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1264 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4381 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7388 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G035000 0.5kb upstream 0.5kb upstream 4872 true Chr04: 4059102-4063973 Phaseolus vulgaris
Phvul.004G035000 0.5kb upstream 0.5kb upstream 500 false Chr04: 4059102-4059601 Phaseolus vulgaris
Phvul.004G035000 0.5kb downstream 0.5kb downstream 4872 true Chr04: 4059602-4064473 Phaseolus vulgaris
Phvul.004G035000 0.5kb downstream 0.5kb downstream 500 false Chr04: 4063974-4064473 Phaseolus vulgaris
Phvul.004G035000 1.0kb upstream 1.0kb upstream 5372 true Chr04: 4058602-4063973 Phaseolus vulgaris
Phvul.004G035000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4058602-4059601 Phaseolus vulgaris
Phvul.004G035000 1.0kb downstream 1.0kb downstream 5372 true Chr04: 4059602-4064973 Phaseolus vulgaris
Phvul.004G035000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4063974-4064973 Phaseolus vulgaris
Phvul.004G035000 2.0kb upstream 2.0kb upstream 6372 true Chr04: 4057602-4063973 Phaseolus vulgaris
Phvul.004G035000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4057602-4059601 Phaseolus vulgaris
Phvul.004G035000 2.0kb downstream 2.0kb downstream 6372 true Chr04: 4059602-4065973 Phaseolus vulgaris
Phvul.004G035000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4063974-4065973 Phaseolus vulgaris
Phvul.004G035000 5.0kb upstream 5.0kb upstream 9372 true Chr04: 4054602-4063973 Phaseolus vulgaris
Phvul.004G035000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4054602-4059601 Phaseolus vulgaris
Phvul.004G035000 5.0kb downstream 5.0kb downstream 9372 true Chr04: 4059602-4068973 Phaseolus vulgaris
Phvul.004G035000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4063974-4068973 Phaseolus vulgaris
Phvul.004G035000 10.0kb upstream 10.0kb upstream 14372 true Chr04: 4049602-4063973 Phaseolus vulgaris
Phvul.004G035000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4049602-4059601 Phaseolus vulgaris
Phvul.004G035000 10.0kb downstream 10.0kb downstream 14372 true Chr04: 4059602-4073973 Phaseolus vulgaris
Phvul.004G035000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4063974-4073973 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5336 0.0 68.9284    
cufflinks 39.3803 0.0 125.65 High  
cufflinks 36.611 0.0 116.882    
cufflinks 74.3597 0.0 246.44 High High
cufflinks 36.2758 0.0 115.615 High  
cufflinks 63.7199 0.0 207.365 High High
cufflinks 19.2034 0.0 64.3782   Low
cufflinks 20.4204 0.0 67.8426    
cufflinks 36.9817 0.0 117.716 High  
cufflinks 14.8096 0.0 52.9185   Low
cufflinks 41.3127 0.0 131.359 High  

0 Strain