Gene : Phvul.004G019200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 Genomic Order:  229
Name:  ? Phvul.004G019200 Secondary Identifier:  ? PAC:37163449
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G019200 0.5kb upstream 0.5kb upstream 1655 true Chr04: 2264053-2265707 Phaseolus vulgaris
Phvul.004G019200 0.5kb upstream 0.5kb upstream 500 false Chr04: 2265208-2265707 Phaseolus vulgaris
Phvul.004G019200 0.5kb downstream 0.5kb downstream 1655 true Chr04: 2263553-2265207 Phaseolus vulgaris
Phvul.004G019200 0.5kb downstream 0.5kb downstream 500 false Chr04: 2263553-2264052 Phaseolus vulgaris
Phvul.004G019200 1.0kb upstream 1.0kb upstream 2155 true Chr04: 2264053-2266207 Phaseolus vulgaris
Phvul.004G019200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2265208-2266207 Phaseolus vulgaris
Phvul.004G019200 1.0kb downstream 1.0kb downstream 2155 true Chr04: 2263053-2265207 Phaseolus vulgaris
Phvul.004G019200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2263053-2264052 Phaseolus vulgaris
Phvul.004G019200 2.0kb upstream 2.0kb upstream 3155 true Chr04: 2264053-2267207 Phaseolus vulgaris
Phvul.004G019200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2265208-2267207 Phaseolus vulgaris
Phvul.004G019200 2.0kb downstream 2.0kb downstream 3155 true Chr04: 2262053-2265207 Phaseolus vulgaris
Phvul.004G019200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2262053-2264052 Phaseolus vulgaris
Phvul.004G019200 5.0kb upstream 5.0kb upstream 6155 true Chr04: 2264053-2270207 Phaseolus vulgaris
Phvul.004G019200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2265208-2270207 Phaseolus vulgaris
Phvul.004G019200 5.0kb downstream 5.0kb downstream 6155 true Chr04: 2259053-2265207 Phaseolus vulgaris
Phvul.004G019200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2259053-2264052 Phaseolus vulgaris
Phvul.004G019200 10.0kb upstream 10.0kb upstream 11155 true Chr04: 2264053-2275207 Phaseolus vulgaris
Phvul.004G019200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2265208-2275207 Phaseolus vulgaris
Phvul.004G019200 10.0kb downstream 10.0kb downstream 11155 true Chr04: 2254053-2265207 Phaseolus vulgaris
Phvul.004G019200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2254053-2264052 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308953 5265 Fabidae View MSA
124064557 5270 Rosid View MSA
123737242 5271 Pentapetalae View MSA
122793388 5272 Eudicot View MSA
122048746 5273 Angiosperm View MSA
121311093 5274 Embryophyte View MSA
123348440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.5992 0.0 65.2278    
cufflinks 33.3668 0.0 87.049 High  
cufflinks 9.09847 0.0 26.5554   Low
cufflinks 25.7997 0.0 67.7272    
cufflinks 19.6804 0.0 52.9355    
cufflinks 16.2518 0.0 44.6928    
cufflinks 12.9867 0.0 36.19    
cufflinks 11.6508 0.0 32.9955    
cufflinks 12.0936 0.0 33.9831    
cufflinks 58.1392 0.0 150.371 High High
cufflinks 27.2446 0.0 71.6586    

0 Strain