Gene : Phvul.004G019500 P. vulgaris v2.1
Defline:  (1 of 3) PF00584 - SecE/Sec61-gamma subunits of protein translocation complex (SecE) Genomic Order:  232
Name:  ? Phvul.004G019500 Secondary Identifier:  ? PAC:37163112
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G019500 0.5kb upstream 0.5kb upstream 5709 true Chr04: 2299396-2305104 Phaseolus vulgaris
Phvul.004G019500 0.5kb upstream 0.5kb upstream 500 false Chr04: 2304605-2305104 Phaseolus vulgaris
Phvul.004G019500 0.5kb downstream 0.5kb downstream 5709 true Chr04: 2298896-2304604 Phaseolus vulgaris
Phvul.004G019500 0.5kb downstream 0.5kb downstream 500 false Chr04: 2298896-2299395 Phaseolus vulgaris
Phvul.004G019500 1.0kb upstream 1.0kb upstream 6209 true Chr04: 2299396-2305604 Phaseolus vulgaris
Phvul.004G019500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2304605-2305604 Phaseolus vulgaris
Phvul.004G019500 1.0kb downstream 1.0kb downstream 6209 true Chr04: 2298396-2304604 Phaseolus vulgaris
Phvul.004G019500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2298396-2299395 Phaseolus vulgaris
Phvul.004G019500 2.0kb upstream 2.0kb upstream 7209 true Chr04: 2299396-2306604 Phaseolus vulgaris
Phvul.004G019500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2304605-2306604 Phaseolus vulgaris
Phvul.004G019500 2.0kb downstream 2.0kb downstream 7209 true Chr04: 2297396-2304604 Phaseolus vulgaris
Phvul.004G019500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2297396-2299395 Phaseolus vulgaris
Phvul.004G019500 5.0kb upstream 5.0kb upstream 10209 true Chr04: 2299396-2309604 Phaseolus vulgaris
Phvul.004G019500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2304605-2309604 Phaseolus vulgaris
Phvul.004G019500 5.0kb downstream 5.0kb downstream 10209 true Chr04: 2294396-2304604 Phaseolus vulgaris
Phvul.004G019500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2294396-2299395 Phaseolus vulgaris
Phvul.004G019500 10.0kb upstream 10.0kb upstream 15209 true Chr04: 2299396-2314604 Phaseolus vulgaris
Phvul.004G019500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2304605-2314604 Phaseolus vulgaris
Phvul.004G019500 10.0kb downstream 10.0kb downstream 15209 true Chr04: 2289396-2304604 Phaseolus vulgaris
Phvul.004G019500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2289396-2299395 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301035 5265 Fabidae View MSA
124068364 5270 Rosid View MSA
123741624 5271 Pentapetalae View MSA
122794104 5272 Eudicot View MSA
122048579 5273 Angiosperm View MSA
121351446 5274 Embryophyte View MSA
123382170 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4537 0.0 53.4458    
cufflinks 16.4675 0.0 60.2213    
cufflinks 21.1116 0.0 73.3697   High
cufflinks 22.2703 0.0 76.4856   High
cufflinks 20.1672 0.0 71.2378    
cufflinks 15.1231 0.0 56.1517    
cufflinks 9.68223 0.0 34.4273   Low
cufflinks 10.9694 0.0 43.7675   Low
cufflinks 15.3769 0.0 57.4522    
cufflinks 18.2136 0.0 65.3628    
cufflinks 17.7021 0.0 63.6512    

0 Strain