Gene : Phvul.004G018100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR30540:SF18 - POTASSIUM TRANSPORTER 8 Genomic Order:  218
Name:  ? Phvul.004G018100 Secondary Identifier:  ? PAC:37163324
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G018100 0.5kb upstream 0.5kb upstream 7142 true Chr04: 2162454-2169595 Phaseolus vulgaris
Phvul.004G018100 0.5kb upstream 0.5kb upstream 500 false Chr04: 2162454-2162953 Phaseolus vulgaris
Phvul.004G018100 0.5kb downstream 0.5kb downstream 7142 true Chr04: 2162954-2170095 Phaseolus vulgaris
Phvul.004G018100 0.5kb downstream 0.5kb downstream 500 false Chr04: 2169596-2170095 Phaseolus vulgaris
Phvul.004G018100 1.0kb upstream 1.0kb upstream 7642 true Chr04: 2161954-2169595 Phaseolus vulgaris
Phvul.004G018100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2161954-2162953 Phaseolus vulgaris
Phvul.004G018100 1.0kb downstream 1.0kb downstream 7642 true Chr04: 2162954-2170595 Phaseolus vulgaris
Phvul.004G018100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2169596-2170595 Phaseolus vulgaris
Phvul.004G018100 2.0kb upstream 2.0kb upstream 8642 true Chr04: 2160954-2169595 Phaseolus vulgaris
Phvul.004G018100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2160954-2162953 Phaseolus vulgaris
Phvul.004G018100 2.0kb downstream 2.0kb downstream 8642 true Chr04: 2162954-2171595 Phaseolus vulgaris
Phvul.004G018100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2169596-2171595 Phaseolus vulgaris
Phvul.004G018100 5.0kb upstream 5.0kb upstream 11642 true Chr04: 2157954-2169595 Phaseolus vulgaris
Phvul.004G018100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2157954-2162953 Phaseolus vulgaris
Phvul.004G018100 5.0kb downstream 5.0kb downstream 11642 true Chr04: 2162954-2174595 Phaseolus vulgaris
Phvul.004G018100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2169596-2174595 Phaseolus vulgaris
Phvul.004G018100 10.0kb upstream 10.0kb upstream 16642 true Chr04: 2152954-2169595 Phaseolus vulgaris
Phvul.004G018100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2152954-2162953 Phaseolus vulgaris
Phvul.004G018100 10.0kb downstream 10.0kb downstream 16642 true Chr04: 2162954-2179595 Phaseolus vulgaris
Phvul.004G018100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2169596-2179595 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310286 5265 Fabidae View MSA
124066176 5270 Rosid View MSA
123746785 5271 Pentapetalae View MSA
122792049 5272 Eudicot View MSA
122043349 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121310109 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.5603 0.0 80.6303   High
cufflinks 20.8187 0.0 54.0098    
cufflinks 29.7426 0.0 78.6598   High
cufflinks 11.3787 0.0 29.6275    
cufflinks 9.55845 0.0 25.0121   Low
cufflinks 22.6765 0.0 58.9908    
cufflinks 12.5864 0.0 32.6148    
cufflinks 8.46835 0.0 22.2375   Low
cufflinks 20.8829 0.0 54.1105    
cufflinks 19.2084 0.0 49.7386    
cufflinks 15.1996 0.0 39.2971    

0 Strain