Gene : Phvul.004G145100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24058:SF23 - SERINE/THREONINE KINASE-RELATED Genomic Order:  1478
Name:  ? Phvul.004G145100 Secondary Identifier:  ? PAC:37162338
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G145100 0.5kb upstream 0.5kb upstream 8561 true Chr04: 44634891-44643451 Phaseolus vulgaris
Phvul.004G145100 0.5kb upstream 0.5kb upstream 500 false Chr04: 44634891-44635390 Phaseolus vulgaris
Phvul.004G145100 0.5kb downstream 0.5kb downstream 8561 true Chr04: 44635391-44643951 Phaseolus vulgaris
Phvul.004G145100 0.5kb downstream 0.5kb downstream 500 false Chr04: 44643452-44643951 Phaseolus vulgaris
Phvul.004G145100 1.0kb upstream 1.0kb upstream 9061 true Chr04: 44634391-44643451 Phaseolus vulgaris
Phvul.004G145100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44634391-44635390 Phaseolus vulgaris
Phvul.004G145100 1.0kb downstream 1.0kb downstream 9061 true Chr04: 44635391-44644451 Phaseolus vulgaris
Phvul.004G145100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44643452-44644451 Phaseolus vulgaris
Phvul.004G145100 2.0kb upstream 2.0kb upstream 10061 true Chr04: 44633391-44643451 Phaseolus vulgaris
Phvul.004G145100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44633391-44635390 Phaseolus vulgaris
Phvul.004G145100 2.0kb downstream 2.0kb downstream 10061 true Chr04: 44635391-44645451 Phaseolus vulgaris
Phvul.004G145100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44643452-44645451 Phaseolus vulgaris
Phvul.004G145100 5.0kb upstream 5.0kb upstream 13061 true Chr04: 44630391-44643451 Phaseolus vulgaris
Phvul.004G145100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44630391-44635390 Phaseolus vulgaris
Phvul.004G145100 5.0kb downstream 5.0kb downstream 13061 true Chr04: 44635391-44648451 Phaseolus vulgaris
Phvul.004G145100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44643452-44648451 Phaseolus vulgaris
Phvul.004G145100 10.0kb upstream 10.0kb upstream 18061 true Chr04: 44625391-44643451 Phaseolus vulgaris
Phvul.004G145100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44625391-44635390 Phaseolus vulgaris
Phvul.004G145100 10.0kb downstream 10.0kb downstream 18061 true Chr04: 44635391-44653451 Phaseolus vulgaris
Phvul.004G145100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44643452-44653451 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301290 5265 Fabidae View MSA
124074554 5270 Rosid View MSA
123747831 5271 Pentapetalae View MSA
122793129 5272 Eudicot View MSA
122050754 5273 Angiosperm View MSA
121345925 5274 Embryophyte View MSA
123425693 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18965 0.0 8.6022   Low
cufflinks 8.7739 0.0 22.6796    
cufflinks 16.2809 0.0 42.9738    
cufflinks 3.47341 0.0 9.39579   Low
cufflinks 11.4384 0.0 29.6186    
cufflinks 19.2705 0.0 51.4438    
cufflinks 21.2446 0.0 57.1256    
cufflinks 32.5894 0.0 91.8376 High High
cufflinks 16.4935 0.0 43.4323    
cufflinks 13.007 0.0 33.8726    
cufflinks 8.34037 0.0 21.566    

0 Strain