Gene : Phvul.007G095400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR12136:SF41 - PLECKSTRIN HOMOLOGY (PH) AND LIPID-BINDING START DOMAIN-CONTAINING PROTEIN Genomic Order:  964
Name:  ? Phvul.007G095400 Secondary Identifier:  ? PAC:37167005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G095400 0.5kb upstream 0.5kb upstream 6806 true Chr07: 10134988-10141793 Phaseolus vulgaris
Phvul.007G095400 0.5kb upstream 0.5kb upstream 500 false Chr07: 10141294-10141793 Phaseolus vulgaris
Phvul.007G095400 0.5kb downstream 0.5kb downstream 6806 true Chr07: 10134488-10141293 Phaseolus vulgaris
Phvul.007G095400 0.5kb downstream 0.5kb downstream 500 false Chr07: 10134488-10134987 Phaseolus vulgaris
Phvul.007G095400 1.0kb upstream 1.0kb upstream 7306 true Chr07: 10134988-10142293 Phaseolus vulgaris
Phvul.007G095400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10141294-10142293 Phaseolus vulgaris
Phvul.007G095400 1.0kb downstream 1.0kb downstream 7306 true Chr07: 10133988-10141293 Phaseolus vulgaris
Phvul.007G095400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10133988-10134987 Phaseolus vulgaris
Phvul.007G095400 2.0kb upstream 2.0kb upstream 8306 true Chr07: 10134988-10143293 Phaseolus vulgaris
Phvul.007G095400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10141294-10143293 Phaseolus vulgaris
Phvul.007G095400 2.0kb downstream 2.0kb downstream 8306 true Chr07: 10132988-10141293 Phaseolus vulgaris
Phvul.007G095400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10132988-10134987 Phaseolus vulgaris
Phvul.007G095400 5.0kb upstream 5.0kb upstream 11306 true Chr07: 10134988-10146293 Phaseolus vulgaris
Phvul.007G095400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10141294-10146293 Phaseolus vulgaris
Phvul.007G095400 5.0kb downstream 5.0kb downstream 11306 true Chr07: 10129988-10141293 Phaseolus vulgaris
Phvul.007G095400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10129988-10134987 Phaseolus vulgaris
Phvul.007G095400 10.0kb upstream 10.0kb upstream 16306 true Chr07: 10134988-10151293 Phaseolus vulgaris
Phvul.007G095400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10141294-10151293 Phaseolus vulgaris
Phvul.007G095400 10.0kb downstream 10.0kb downstream 16306 true Chr07: 10124988-10141293 Phaseolus vulgaris
Phvul.007G095400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10124988-10134987 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307511 5265 Fabidae View MSA
124064744 5270 Rosid View MSA
123746336 5271 Pentapetalae View MSA
122790563 5272 Eudicot View MSA
122046452 5273 Angiosperm View MSA
121347989 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.84651 0.0 23.2533   High
cufflinks 0.326391 0.0 1.19972 Low  
cufflinks 0.203015 0.0 0.774227 Low  
cufflinks 11.0524 0.0 28.8843   High
cufflinks 0.443119 0.0 1.59293 Low  
cufflinks 0.338435 0.0 1.23918 Low  
cufflinks 0.185497 0.0 0.713461 Low  
cufflinks 0.0573801 0.0 0.241938 Low Low
cufflinks 0.338025 0.0 1.24024 Low  
cufflinks 0.0821617 0.0 0.337543 Low Low
cufflinks 0.697582 0.0 2.3886    

0 Strain