Gene : Phvul.007G083800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Genomic Order:  846
Name:  ? Phvul.007G083800 Secondary Identifier:  ? PAC:37166920
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3385 Phaseolus vulgaris pathologic  
Pvulgaris PWY3O-450 Phaseolus vulgaris pathologic  
Pvulgaris PWY4FS-6 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G083800 0.5kb upstream 0.5kb upstream 5045 true Chr07: 8440613-8445657 Phaseolus vulgaris
Phvul.007G083800 0.5kb upstream 0.5kb upstream 500 false Chr07: 8440613-8441112 Phaseolus vulgaris
Phvul.007G083800 0.5kb downstream 0.5kb downstream 5045 true Chr07: 8441113-8446157 Phaseolus vulgaris
Phvul.007G083800 0.5kb downstream 0.5kb downstream 500 false Chr07: 8445658-8446157 Phaseolus vulgaris
Phvul.007G083800 1.0kb upstream 1.0kb upstream 5545 true Chr07: 8440113-8445657 Phaseolus vulgaris
Phvul.007G083800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8440113-8441112 Phaseolus vulgaris
Phvul.007G083800 1.0kb downstream 1.0kb downstream 5545 true Chr07: 8441113-8446657 Phaseolus vulgaris
Phvul.007G083800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8445658-8446657 Phaseolus vulgaris
Phvul.007G083800 2.0kb upstream 2.0kb upstream 6545 true Chr07: 8439113-8445657 Phaseolus vulgaris
Phvul.007G083800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8439113-8441112 Phaseolus vulgaris
Phvul.007G083800 2.0kb downstream 2.0kb downstream 6545 true Chr07: 8441113-8447657 Phaseolus vulgaris
Phvul.007G083800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8445658-8447657 Phaseolus vulgaris
Phvul.007G083800 5.0kb upstream 5.0kb upstream 9545 true Chr07: 8436113-8445657 Phaseolus vulgaris
Phvul.007G083800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8436113-8441112 Phaseolus vulgaris
Phvul.007G083800 5.0kb downstream 5.0kb downstream 9545 true Chr07: 8441113-8450657 Phaseolus vulgaris
Phvul.007G083800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8445658-8450657 Phaseolus vulgaris
Phvul.007G083800 10.0kb upstream 10.0kb upstream 14545 true Chr07: 8431113-8445657 Phaseolus vulgaris
Phvul.007G083800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8431113-8441112 Phaseolus vulgaris
Phvul.007G083800 10.0kb downstream 10.0kb downstream 14545 true Chr07: 8441113-8455657 Phaseolus vulgaris
Phvul.007G083800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8445658-8455657 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311650 5265 Fabidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.1888 0.0 200.159 High High
cufflinks 13.5387 0.0 49.0471    
cufflinks 2.99412 0.0 13.0763    
cufflinks 2.78275 0.0 14.993    
cufflinks 4.82426 0.0 19.4851    
cufflinks 0.67058 0.0 4.10733   Low
cufflinks 8.07612 0.0 31.8021    
cufflinks 7.4826 0.0 32.2172    
cufflinks 4.84293 0.0 21.787    
cufflinks 8.24707 0.0 35.916    
cufflinks 13.2756 0.0 52.7871    

0 Strain