Gene : Phvul.007G083500 P. vulgaris v2.1
Defline:  (1 of 2) K12124 - GIGANTEA (GI) Genomic Order:  843
Name:  ? Phvul.007G083500 Secondary Identifier:  ? PAC:37167229
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G083500 0.5kb upstream 0.5kb upstream 19022 true Chr07: 8381509-8400530 Phaseolus vulgaris
Phvul.007G083500 0.5kb upstream 0.5kb upstream 500 false Chr07: 8400031-8400530 Phaseolus vulgaris
Phvul.007G083500 0.5kb downstream 0.5kb downstream 19022 true Chr07: 8381009-8400030 Phaseolus vulgaris
Phvul.007G083500 0.5kb downstream 0.5kb downstream 500 false Chr07: 8381009-8381508 Phaseolus vulgaris
Phvul.007G083500 1.0kb upstream 1.0kb upstream 19522 true Chr07: 8381509-8401030 Phaseolus vulgaris
Phvul.007G083500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8400031-8401030 Phaseolus vulgaris
Phvul.007G083500 1.0kb downstream 1.0kb downstream 19522 true Chr07: 8380509-8400030 Phaseolus vulgaris
Phvul.007G083500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8380509-8381508 Phaseolus vulgaris
Phvul.007G083500 2.0kb upstream 2.0kb upstream 20522 true Chr07: 8381509-8402030 Phaseolus vulgaris
Phvul.007G083500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8400031-8402030 Phaseolus vulgaris
Phvul.007G083500 2.0kb downstream 2.0kb downstream 20522 true Chr07: 8379509-8400030 Phaseolus vulgaris
Phvul.007G083500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8379509-8381508 Phaseolus vulgaris
Phvul.007G083500 5.0kb upstream 5.0kb upstream 23522 true Chr07: 8381509-8405030 Phaseolus vulgaris
Phvul.007G083500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8400031-8405030 Phaseolus vulgaris
Phvul.007G083500 5.0kb downstream 5.0kb downstream 23522 true Chr07: 8376509-8400030 Phaseolus vulgaris
Phvul.007G083500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8376509-8381508 Phaseolus vulgaris
Phvul.007G083500 10.0kb upstream 10.0kb upstream 28522 true Chr07: 8381509-8410030 Phaseolus vulgaris
Phvul.007G083500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8400031-8410030 Phaseolus vulgaris
Phvul.007G083500 10.0kb downstream 10.0kb downstream 28522 true Chr07: 8371509-8400030 Phaseolus vulgaris
Phvul.007G083500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8371509-8381508 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307360 5265 Fabidae View MSA
124064536 5270 Rosid View MSA
123738488 5271 Pentapetalae View MSA
122787616 5272 Eudicot View MSA
122046361 5273 Angiosperm View MSA
121310594 5274 Embryophyte View MSA
123348039 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.0675 0.0 182.359 High Low
cufflinks 47.5391 0.0 159.27 High Low
cufflinks 126.164 0.0 597.261 High High
cufflinks 41.6013 0.0 155.282 High Low
cufflinks 58.3059 0.0 208.085 High  
cufflinks 65.94 0.0 241.251 High  
cufflinks 117.991 0.0 526.032 High High
cufflinks 95.5961 0.0 400.828 High  
cufflinks 88.5476 0.0 351.771 High  
cufflinks 104.63 0.0 451.265 High  
cufflinks 51.7462 0.0 181.671 High  

0 Strain