Gene : Phvul.007G083400 P. vulgaris v2.1
Defline:  (1 of 2) K02964 - small subunit ribosomal protein S18e (RP-S18e, RPS18) Genomic Order:  842
Name:  ? Phvul.007G083400 Secondary Identifier:  ? PAC:37167023
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G083400 0.5kb upstream 0.5kb upstream 2320 true Chr07: 8378152-8380471 Phaseolus vulgaris
Phvul.007G083400 0.5kb upstream 0.5kb upstream 500 false Chr07: 8379972-8380471 Phaseolus vulgaris
Phvul.007G083400 0.5kb downstream 0.5kb downstream 2320 true Chr07: 8377652-8379971 Phaseolus vulgaris
Phvul.007G083400 0.5kb downstream 0.5kb downstream 500 false Chr07: 8377652-8378151 Phaseolus vulgaris
Phvul.007G083400 1.0kb upstream 1.0kb upstream 2820 true Chr07: 8378152-8380971 Phaseolus vulgaris
Phvul.007G083400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8379972-8380971 Phaseolus vulgaris
Phvul.007G083400 1.0kb downstream 1.0kb downstream 2820 true Chr07: 8377152-8379971 Phaseolus vulgaris
Phvul.007G083400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8377152-8378151 Phaseolus vulgaris
Phvul.007G083400 2.0kb upstream 2.0kb upstream 3820 true Chr07: 8378152-8381971 Phaseolus vulgaris
Phvul.007G083400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8379972-8381971 Phaseolus vulgaris
Phvul.007G083400 2.0kb downstream 2.0kb downstream 3820 true Chr07: 8376152-8379971 Phaseolus vulgaris
Phvul.007G083400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8376152-8378151 Phaseolus vulgaris
Phvul.007G083400 5.0kb upstream 5.0kb upstream 6820 true Chr07: 8378152-8384971 Phaseolus vulgaris
Phvul.007G083400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8379972-8384971 Phaseolus vulgaris
Phvul.007G083400 5.0kb downstream 5.0kb downstream 6820 true Chr07: 8373152-8379971 Phaseolus vulgaris
Phvul.007G083400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8373152-8378151 Phaseolus vulgaris
Phvul.007G083400 10.0kb upstream 10.0kb upstream 11820 true Chr07: 8378152-8389971 Phaseolus vulgaris
Phvul.007G083400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8379972-8389971 Phaseolus vulgaris
Phvul.007G083400 10.0kb downstream 10.0kb downstream 11820 true Chr07: 8368152-8379971 Phaseolus vulgaris
Phvul.007G083400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8368152-8378151 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312708 5265 Fabidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 143.739 0.0 391.031 High  
cufflinks 219.456 0.0 625.172 High High
cufflinks 89.3384 0.0 234.294 High Low
cufflinks 223.467 0.0 637.63 High High
cufflinks 164.94 0.0 453.573 High  
cufflinks 82.0168 0.0 214.392 High Low
cufflinks 142.247 0.0 387.893 High  
cufflinks 185.075 0.0 516.621 High  
cufflinks 194.594 0.0 549.406 High  
cufflinks 68.9639 0.0 179.004 High Low
cufflinks 159.227 0.0 437.694 High  

0 Strain