Gene : Phvul.007G076550 P. vulgaris v2.1
Defline:  (1 of 10) PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  771
Name:  ? Phvul.007G076550 Secondary Identifier:  ? PAC:37166752
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G076550 0.5kb upstream 0.5kb upstream 2150 true Chr07: 7259881-7262030 Phaseolus vulgaris
Phvul.007G076550 0.5kb upstream 0.5kb upstream 500 false Chr07: 7261531-7262030 Phaseolus vulgaris
Phvul.007G076550 0.5kb downstream 0.5kb downstream 2150 true Chr07: 7259381-7261530 Phaseolus vulgaris
Phvul.007G076550 0.5kb downstream 0.5kb downstream 500 false Chr07: 7259381-7259880 Phaseolus vulgaris
Phvul.007G076550 1.0kb upstream 1.0kb upstream 2650 true Chr07: 7259881-7262530 Phaseolus vulgaris
Phvul.007G076550 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7261531-7262530 Phaseolus vulgaris
Phvul.007G076550 1.0kb downstream 1.0kb downstream 2650 true Chr07: 7258881-7261530 Phaseolus vulgaris
Phvul.007G076550 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7258881-7259880 Phaseolus vulgaris
Phvul.007G076550 2.0kb upstream 2.0kb upstream 3650 true Chr07: 7259881-7263530 Phaseolus vulgaris
Phvul.007G076550 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7261531-7263530 Phaseolus vulgaris
Phvul.007G076550 2.0kb downstream 2.0kb downstream 3650 true Chr07: 7257881-7261530 Phaseolus vulgaris
Phvul.007G076550 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7257881-7259880 Phaseolus vulgaris
Phvul.007G076550 5.0kb upstream 5.0kb upstream 6650 true Chr07: 7259881-7266530 Phaseolus vulgaris
Phvul.007G076550 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7261531-7266530 Phaseolus vulgaris
Phvul.007G076550 5.0kb downstream 5.0kb downstream 6650 true Chr07: 7254881-7261530 Phaseolus vulgaris
Phvul.007G076550 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7254881-7259880 Phaseolus vulgaris
Phvul.007G076550 10.0kb upstream 10.0kb upstream 11650 true Chr07: 7259881-7271530 Phaseolus vulgaris
Phvul.007G076550 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7261531-7271530 Phaseolus vulgaris
Phvul.007G076550 10.0kb downstream 10.0kb downstream 11650 true Chr07: 7249881-7261530 Phaseolus vulgaris
Phvul.007G076550 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7249881-7259880 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309528 5265 Fabidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.494335 0.0 1.89659    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.85676 0.0 14.9135    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0155182 0.0 0.083355 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain