Gene : Phvul.007G077200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  780
Name:  ? Phvul.007G077200 Secondary Identifier:  ? PAC:37165668
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G077200 0.5kb upstream 0.5kb upstream 9091 true Chr07: 7376811-7385901 Phaseolus vulgaris
Phvul.007G077200 0.5kb upstream 0.5kb upstream 500 false Chr07: 7385402-7385901 Phaseolus vulgaris
Phvul.007G077200 0.5kb downstream 0.5kb downstream 9091 true Chr07: 7376311-7385401 Phaseolus vulgaris
Phvul.007G077200 0.5kb downstream 0.5kb downstream 500 false Chr07: 7376311-7376810 Phaseolus vulgaris
Phvul.007G077200 1.0kb upstream 1.0kb upstream 9591 true Chr07: 7376811-7386401 Phaseolus vulgaris
Phvul.007G077200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7385402-7386401 Phaseolus vulgaris
Phvul.007G077200 1.0kb downstream 1.0kb downstream 9591 true Chr07: 7375811-7385401 Phaseolus vulgaris
Phvul.007G077200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7375811-7376810 Phaseolus vulgaris
Phvul.007G077200 2.0kb upstream 2.0kb upstream 10591 true Chr07: 7376811-7387401 Phaseolus vulgaris
Phvul.007G077200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7385402-7387401 Phaseolus vulgaris
Phvul.007G077200 2.0kb downstream 2.0kb downstream 10591 true Chr07: 7374811-7385401 Phaseolus vulgaris
Phvul.007G077200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7374811-7376810 Phaseolus vulgaris
Phvul.007G077200 5.0kb upstream 5.0kb upstream 13591 true Chr07: 7376811-7390401 Phaseolus vulgaris
Phvul.007G077200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7385402-7390401 Phaseolus vulgaris
Phvul.007G077200 5.0kb downstream 5.0kb downstream 13591 true Chr07: 7371811-7385401 Phaseolus vulgaris
Phvul.007G077200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7371811-7376810 Phaseolus vulgaris
Phvul.007G077200 10.0kb upstream 10.0kb upstream 18591 true Chr07: 7376811-7395401 Phaseolus vulgaris
Phvul.007G077200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7385402-7395401 Phaseolus vulgaris
Phvul.007G077200 10.0kb downstream 10.0kb downstream 18591 true Chr07: 7366811-7385401 Phaseolus vulgaris
Phvul.007G077200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7366811-7376810 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316138 5265 Fabidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9945 0.0 64.8904   High
cufflinks 6.52638 0.0 24.7414    
cufflinks 13.6902 0.0 52.4095   High
cufflinks 15.6468 0.0 58.8705   High
cufflinks 5.38086 0.0 22.9215    
cufflinks 5.98324 0.0 24.6539    
cufflinks 3.47662 0.0 15.947    
cufflinks 3.41388 0.0 16.5625    
cufflinks 2.87161 0.0 10.7179   Low
cufflinks 5.95132 0.0 25.1699    
cufflinks 4.47702 0.0 19.7088    

0 Strain