Gene : Phvul.004G126400 P. vulgaris v2.1
Defline:  (1 of 2) K14270 - aminotransferase (ACS10_12) Genomic Order:  1290
Name:  ? Phvul.004G126400 Secondary Identifier:  ? PAC:37162587
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G126400 0.5kb upstream 0.5kb upstream 4430 true Chr04: 42227184-42231613 Phaseolus vulgaris
Phvul.004G126400 0.5kb upstream 0.5kb upstream 500 false Chr04: 42227184-42227683 Phaseolus vulgaris
Phvul.004G126400 0.5kb downstream 0.5kb downstream 4430 true Chr04: 42227684-42232113 Phaseolus vulgaris
Phvul.004G126400 0.5kb downstream 0.5kb downstream 500 false Chr04: 42231614-42232113 Phaseolus vulgaris
Phvul.004G126400 1.0kb upstream 1.0kb upstream 4930 true Chr04: 42226684-42231613 Phaseolus vulgaris
Phvul.004G126400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42226684-42227683 Phaseolus vulgaris
Phvul.004G126400 1.0kb downstream 1.0kb downstream 4930 true Chr04: 42227684-42232613 Phaseolus vulgaris
Phvul.004G126400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42231614-42232613 Phaseolus vulgaris
Phvul.004G126400 2.0kb upstream 2.0kb upstream 5930 true Chr04: 42225684-42231613 Phaseolus vulgaris
Phvul.004G126400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42225684-42227683 Phaseolus vulgaris
Phvul.004G126400 2.0kb downstream 2.0kb downstream 5930 true Chr04: 42227684-42233613 Phaseolus vulgaris
Phvul.004G126400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42231614-42233613 Phaseolus vulgaris
Phvul.004G126400 5.0kb upstream 5.0kb upstream 8930 true Chr04: 42222684-42231613 Phaseolus vulgaris
Phvul.004G126400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42222684-42227683 Phaseolus vulgaris
Phvul.004G126400 5.0kb downstream 5.0kb downstream 8930 true Chr04: 42227684-42236613 Phaseolus vulgaris
Phvul.004G126400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42231614-42236613 Phaseolus vulgaris
Phvul.004G126400 10.0kb upstream 10.0kb upstream 13930 true Chr04: 42217684-42231613 Phaseolus vulgaris
Phvul.004G126400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42217684-42227683 Phaseolus vulgaris
Phvul.004G126400 10.0kb downstream 10.0kb downstream 13930 true Chr04: 42227684-42241613 Phaseolus vulgaris
Phvul.004G126400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42231614-42241613 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314101 5265 Fabidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.11056 0.0 22.0526    
cufflinks 8.20378 0.0 22.3753    
cufflinks 12.908 0.0 34.004   High
cufflinks 7.46435 0.0 20.5015    
cufflinks 6.08977 0.0 17.0182    
cufflinks 13.039 0.0 34.348   High
cufflinks 5.53892 0.0 15.6032    
cufflinks 10.2494 0.0 27.3966    
cufflinks 3.4075 0.0 10.1477   Low
cufflinks 7.0684 0.0 19.4987    
cufflinks 7.23744 0.0 19.9479    

0 Strain