Gene : Phvul.004G130100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33414:SF2 - PLASTID MOVEMENT IMPAIRED1 Genomic Order:  1325
Name:  ? Phvul.004G130100 Secondary Identifier:  ? PAC:37161904
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G130100 0.5kb upstream 0.5kb upstream 3652 true Chr04: 42652443-42656094 Phaseolus vulgaris
Phvul.004G130100 0.5kb upstream 0.5kb upstream 500 false Chr04: 42652443-42652942 Phaseolus vulgaris
Phvul.004G130100 0.5kb downstream 0.5kb downstream 3652 true Chr04: 42652943-42656594 Phaseolus vulgaris
Phvul.004G130100 0.5kb downstream 0.5kb downstream 500 false Chr04: 42656095-42656594 Phaseolus vulgaris
Phvul.004G130100 1.0kb upstream 1.0kb upstream 4152 true Chr04: 42651943-42656094 Phaseolus vulgaris
Phvul.004G130100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42651943-42652942 Phaseolus vulgaris
Phvul.004G130100 1.0kb downstream 1.0kb downstream 4152 true Chr04: 42652943-42657094 Phaseolus vulgaris
Phvul.004G130100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42656095-42657094 Phaseolus vulgaris
Phvul.004G130100 2.0kb upstream 2.0kb upstream 5152 true Chr04: 42650943-42656094 Phaseolus vulgaris
Phvul.004G130100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42650943-42652942 Phaseolus vulgaris
Phvul.004G130100 2.0kb downstream 2.0kb downstream 5152 true Chr04: 42652943-42658094 Phaseolus vulgaris
Phvul.004G130100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42656095-42658094 Phaseolus vulgaris
Phvul.004G130100 5.0kb upstream 5.0kb upstream 8152 true Chr04: 42647943-42656094 Phaseolus vulgaris
Phvul.004G130100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42647943-42652942 Phaseolus vulgaris
Phvul.004G130100 5.0kb downstream 5.0kb downstream 8152 true Chr04: 42652943-42661094 Phaseolus vulgaris
Phvul.004G130100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42656095-42661094 Phaseolus vulgaris
Phvul.004G130100 10.0kb upstream 10.0kb upstream 13152 true Chr04: 42642943-42656094 Phaseolus vulgaris
Phvul.004G130100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42642943-42652942 Phaseolus vulgaris
Phvul.004G130100 10.0kb downstream 10.0kb downstream 13152 true Chr04: 42652943-42666094 Phaseolus vulgaris
Phvul.004G130100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42656095-42666094 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310064 5265 Fabidae View MSA
124066768 5270 Rosid View MSA
123738803 5271 Pentapetalae View MSA
122793466 5272 Eudicot View MSA
122045060 5273 Angiosperm View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31876 0.0 4.07951    
cufflinks 6.66347 0.0 17.5956   High
cufflinks 0.690439 0.0 2.28582    
cufflinks 1.13176 0.0 3.59332    
cufflinks 0.26162 0.0 0.969079 Low  
cufflinks 4.33017 0.0 11.8113   High
cufflinks 0.114196 0.0 0.447563 Low Low
cufflinks 0.0901439 0.0 0.359115 Low Low
cufflinks 0.0901823 0.0 0.360177 Low Low
cufflinks 3.97484 0.0 10.9524   High
cufflinks 1.45379 0.0 4.46509    

0 Strain