Gene : Phvul.007G081800 P. vulgaris v2.1
Defline:  (1 of 2) K02925 - large subunit ribosomal protein L3e (RP-L3e, RPL3) Genomic Order:  826
Name:  ? Phvul.007G081800 Secondary Identifier:  ? PAC:37166242
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G081800 0.5kb upstream 0.5kb upstream 3673 true Chr07: 8183928-8187600 Phaseolus vulgaris
Phvul.007G081800 0.5kb upstream 0.5kb upstream 500 false Chr07: 8183928-8184427 Phaseolus vulgaris
Phvul.007G081800 0.5kb downstream 0.5kb downstream 3673 true Chr07: 8184428-8188100 Phaseolus vulgaris
Phvul.007G081800 0.5kb downstream 0.5kb downstream 500 false Chr07: 8187601-8188100 Phaseolus vulgaris
Phvul.007G081800 1.0kb upstream 1.0kb upstream 4173 true Chr07: 8183428-8187600 Phaseolus vulgaris
Phvul.007G081800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8183428-8184427 Phaseolus vulgaris
Phvul.007G081800 1.0kb downstream 1.0kb downstream 4173 true Chr07: 8184428-8188600 Phaseolus vulgaris
Phvul.007G081800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8187601-8188600 Phaseolus vulgaris
Phvul.007G081800 2.0kb upstream 2.0kb upstream 5173 true Chr07: 8182428-8187600 Phaseolus vulgaris
Phvul.007G081800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8182428-8184427 Phaseolus vulgaris
Phvul.007G081800 2.0kb downstream 2.0kb downstream 5173 true Chr07: 8184428-8189600 Phaseolus vulgaris
Phvul.007G081800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8187601-8189600 Phaseolus vulgaris
Phvul.007G081800 5.0kb upstream 5.0kb upstream 8173 true Chr07: 8179428-8187600 Phaseolus vulgaris
Phvul.007G081800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8179428-8184427 Phaseolus vulgaris
Phvul.007G081800 5.0kb downstream 5.0kb downstream 8173 true Chr07: 8184428-8192600 Phaseolus vulgaris
Phvul.007G081800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8187601-8192600 Phaseolus vulgaris
Phvul.007G081800 10.0kb upstream 10.0kb upstream 13173 true Chr07: 8174428-8187600 Phaseolus vulgaris
Phvul.007G081800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8174428-8184427 Phaseolus vulgaris
Phvul.007G081800 10.0kb downstream 10.0kb downstream 13173 true Chr07: 8184428-8197600 Phaseolus vulgaris
Phvul.007G081800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8187601-8197600 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310538 5265 Fabidae View MSA
124066919 5270 Rosid View MSA
123741498 5271 Pentapetalae View MSA
122796650 5272 Eudicot View MSA
122047295 5273 Angiosperm View MSA
121345425 5274 Embryophyte View MSA
123426752 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 220.431 0.0 686.5 High  
cufflinks 376.483 0.0 1303.25 High High
cufflinks 163.867 0.0 488.458 High Low
cufflinks 291.203 0.0 942.597 High  
cufflinks 250.634 0.0 797.214 High  
cufflinks 165.562 0.0 493.161 High Low
cufflinks 252.896 0.0 811.396 High  
cufflinks 262.703 0.0 848.486 High  
cufflinks 369.428 0.0 1277.33 High High
cufflinks 152.559 0.0 448.416 High Low
cufflinks 269.175 0.0 869.283 High  

0 Strain