Gene : Phvul.007G080500 P. vulgaris v2.1
Defline:  (1 of 2) K02964 - small subunit ribosomal protein S18e (RP-S18e, RPS18) Genomic Order:  813
Name:  ? Phvul.007G080500 Secondary Identifier:  ? PAC:37165095
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G080500 0.5kb upstream 0.5kb upstream 2267 true Chr07: 7892551-7894817 Phaseolus vulgaris
Phvul.007G080500 0.5kb upstream 0.5kb upstream 500 false Chr07: 7892551-7893050 Phaseolus vulgaris
Phvul.007G080500 0.5kb downstream 0.5kb downstream 2267 true Chr07: 7893051-7895317 Phaseolus vulgaris
Phvul.007G080500 0.5kb downstream 0.5kb downstream 500 false Chr07: 7894818-7895317 Phaseolus vulgaris
Phvul.007G080500 1.0kb upstream 1.0kb upstream 2767 true Chr07: 7892051-7894817 Phaseolus vulgaris
Phvul.007G080500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7892051-7893050 Phaseolus vulgaris
Phvul.007G080500 1.0kb downstream 1.0kb downstream 2767 true Chr07: 7893051-7895817 Phaseolus vulgaris
Phvul.007G080500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7894818-7895817 Phaseolus vulgaris
Phvul.007G080500 2.0kb upstream 2.0kb upstream 3767 true Chr07: 7891051-7894817 Phaseolus vulgaris
Phvul.007G080500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7891051-7893050 Phaseolus vulgaris
Phvul.007G080500 2.0kb downstream 2.0kb downstream 3767 true Chr07: 7893051-7896817 Phaseolus vulgaris
Phvul.007G080500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7894818-7896817 Phaseolus vulgaris
Phvul.007G080500 5.0kb upstream 5.0kb upstream 6767 true Chr07: 7888051-7894817 Phaseolus vulgaris
Phvul.007G080500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7888051-7893050 Phaseolus vulgaris
Phvul.007G080500 5.0kb downstream 5.0kb downstream 6767 true Chr07: 7893051-7899817 Phaseolus vulgaris
Phvul.007G080500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7894818-7899817 Phaseolus vulgaris
Phvul.007G080500 10.0kb upstream 10.0kb upstream 11767 true Chr07: 7883051-7894817 Phaseolus vulgaris
Phvul.007G080500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7883051-7893050 Phaseolus vulgaris
Phvul.007G080500 10.0kb downstream 10.0kb downstream 11767 true Chr07: 7893051-7904817 Phaseolus vulgaris
Phvul.007G080500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7894818-7904817 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312708 5265 Fabidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.3094 0.0 227.946 High  
cufflinks 149.849 0.0 406.81 High High
cufflinks 73.6035 0.0 191.026 High  
cufflinks 143.244 0.0 386.732 High High
cufflinks 99.5022 0.0 261.232 High  
cufflinks 59.7114 0.0 154.412 High Low
cufflinks 87.6995 0.0 229.419 High  
cufflinks 126.913 0.0 339.54 High  
cufflinks 123.469 0.0 330.597 High  
cufflinks 40.3059 0.0 104.647 High Low
cufflinks 106.208 0.0 280.374 High  

0 Strain