Gene : Phvul.004G114200 P. vulgaris v2.1
Defline:  (1 of 2) K01280 - tripeptidyl-peptidase II [EC:3.4.14.10] (TPP2) Genomic Order:  1167
Name:  ? Phvul.004G114200 Secondary Identifier:  ? PAC:37163044
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G114200 0.5kb upstream 0.5kb upstream 25446 true Chr04: 39423189-39448634 Phaseolus vulgaris
Phvul.004G114200 0.5kb upstream 0.5kb upstream 500 false Chr04: 39423189-39423688 Phaseolus vulgaris
Phvul.004G114200 0.5kb downstream 0.5kb downstream 25446 true Chr04: 39423689-39449134 Phaseolus vulgaris
Phvul.004G114200 0.5kb downstream 0.5kb downstream 500 false Chr04: 39448635-39449134 Phaseolus vulgaris
Phvul.004G114200 1.0kb upstream 1.0kb upstream 25946 true Chr04: 39422689-39448634 Phaseolus vulgaris
Phvul.004G114200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 39422689-39423688 Phaseolus vulgaris
Phvul.004G114200 1.0kb downstream 1.0kb downstream 25946 true Chr04: 39423689-39449634 Phaseolus vulgaris
Phvul.004G114200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 39448635-39449634 Phaseolus vulgaris
Phvul.004G114200 2.0kb upstream 2.0kb upstream 26946 true Chr04: 39421689-39448634 Phaseolus vulgaris
Phvul.004G114200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 39421689-39423688 Phaseolus vulgaris
Phvul.004G114200 2.0kb downstream 2.0kb downstream 26946 true Chr04: 39423689-39450634 Phaseolus vulgaris
Phvul.004G114200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 39448635-39450634 Phaseolus vulgaris
Phvul.004G114200 5.0kb upstream 5.0kb upstream 29946 true Chr04: 39418689-39448634 Phaseolus vulgaris
Phvul.004G114200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 39418689-39423688 Phaseolus vulgaris
Phvul.004G114200 5.0kb downstream 5.0kb downstream 29946 true Chr04: 39423689-39453634 Phaseolus vulgaris
Phvul.004G114200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 39448635-39453634 Phaseolus vulgaris
Phvul.004G114200 10.0kb upstream 10.0kb upstream 34946 true Chr04: 39413689-39448634 Phaseolus vulgaris
Phvul.004G114200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 39413689-39423688 Phaseolus vulgaris
Phvul.004G114200 10.0kb downstream 10.0kb downstream 34946 true Chr04: 39423689-39458634 Phaseolus vulgaris
Phvul.004G114200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 39448635-39458634 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311549 5265 Fabidae View MSA
124060927 5270 Rosid View MSA
123739019 5271 Pentapetalae View MSA
122789834 5272 Eudicot View MSA
122045900 5273 Angiosperm View MSA
121344664 5274 Embryophyte View MSA
123424480 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5897 0.0 53.0788   Low
cufflinks 30.8648 0.0 103.752    
cufflinks 37.5757 0.0 126.658    
cufflinks 14.0217 0.0 40.7796   Low
cufflinks 40.308 0.0 142.704 High  
cufflinks 38.9404 0.0 138.586 High  
cufflinks 56.5079 0.0 213.089 High  
cufflinks 40.6892 0.0 147.511 High  
cufflinks 91.7193 0.0 410.374 High High
cufflinks 93.5683 0.0 422.374 High High
cufflinks 32.8539 0.0 109.616    

0 Strain