Gene : Phvul.004G120100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR35501:SF2 - PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN-RELATED Genomic Order:  1226
Name:  ? Phvul.004G120100 Secondary Identifier:  ? PAC:37163363
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G120100 0.5kb upstream 0.5kb upstream 824 true Chr04: 40976127-40976950 Phaseolus vulgaris
Phvul.004G120100 0.5kb upstream 0.5kb upstream 500 false Chr04: 40976127-40976626 Phaseolus vulgaris
Phvul.004G120100 0.5kb downstream 0.5kb downstream 824 true Chr04: 40976627-40977450 Phaseolus vulgaris
Phvul.004G120100 0.5kb downstream 0.5kb downstream 500 false Chr04: 40976951-40977450 Phaseolus vulgaris
Phvul.004G120100 1.0kb upstream 1.0kb upstream 1324 true Chr04: 40975627-40976950 Phaseolus vulgaris
Phvul.004G120100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40975627-40976626 Phaseolus vulgaris
Phvul.004G120100 1.0kb downstream 1.0kb downstream 1324 true Chr04: 40976627-40977950 Phaseolus vulgaris
Phvul.004G120100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40976951-40977950 Phaseolus vulgaris
Phvul.004G120100 2.0kb upstream 2.0kb upstream 2324 true Chr04: 40974627-40976950 Phaseolus vulgaris
Phvul.004G120100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40974627-40976626 Phaseolus vulgaris
Phvul.004G120100 2.0kb downstream 2.0kb downstream 2324 true Chr04: 40976627-40978950 Phaseolus vulgaris
Phvul.004G120100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40976951-40978950 Phaseolus vulgaris
Phvul.004G120100 5.0kb upstream 5.0kb upstream 5324 true Chr04: 40971627-40976950 Phaseolus vulgaris
Phvul.004G120100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40971627-40976626 Phaseolus vulgaris
Phvul.004G120100 5.0kb downstream 5.0kb downstream 5324 true Chr04: 40976627-40981950 Phaseolus vulgaris
Phvul.004G120100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40976951-40981950 Phaseolus vulgaris
Phvul.004G120100 10.0kb upstream 10.0kb upstream 10324 true Chr04: 40966627-40976950 Phaseolus vulgaris
Phvul.004G120100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40966627-40976626 Phaseolus vulgaris
Phvul.004G120100 10.0kb downstream 10.0kb downstream 10324 true Chr04: 40976627-40986950 Phaseolus vulgaris
Phvul.004G120100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40976951-40986950 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309728 5265 Fabidae View MSA
124050324 5270 Rosid View MSA
123739787 5271 Pentapetalae View MSA
122794916 5272 Eudicot View MSA
122045220 5273 Angiosperm View MSA
121310419 5274 Embryophyte View MSA
123347907 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain