Gene : Phvul.004G122700 P. vulgaris v2.1
Defline:  (1 of 1) 1.1.1.140 - Sorbitol-6-phosphate 2-dehydrogenase / Ketosephosphate reductase Genomic Order:  1253
Name:  ? Phvul.004G122700 Secondary Identifier:  ? PAC:37162589
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris SORBDEG-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G122700 0.5kb upstream 0.5kb upstream 4010 true Chr04: 41479350-41483359 Phaseolus vulgaris
Phvul.004G122700 0.5kb upstream 0.5kb upstream 500 false Chr04: 41482860-41483359 Phaseolus vulgaris
Phvul.004G122700 0.5kb downstream 0.5kb downstream 4010 true Chr04: 41478850-41482859 Phaseolus vulgaris
Phvul.004G122700 0.5kb downstream 0.5kb downstream 500 false Chr04: 41478850-41479349 Phaseolus vulgaris
Phvul.004G122700 1.0kb upstream 1.0kb upstream 4510 true Chr04: 41479350-41483859 Phaseolus vulgaris
Phvul.004G122700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 41482860-41483859 Phaseolus vulgaris
Phvul.004G122700 1.0kb downstream 1.0kb downstream 4510 true Chr04: 41478350-41482859 Phaseolus vulgaris
Phvul.004G122700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 41478350-41479349 Phaseolus vulgaris
Phvul.004G122700 2.0kb upstream 2.0kb upstream 5510 true Chr04: 41479350-41484859 Phaseolus vulgaris
Phvul.004G122700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 41482860-41484859 Phaseolus vulgaris
Phvul.004G122700 2.0kb downstream 2.0kb downstream 5510 true Chr04: 41477350-41482859 Phaseolus vulgaris
Phvul.004G122700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 41477350-41479349 Phaseolus vulgaris
Phvul.004G122700 5.0kb upstream 5.0kb upstream 8510 true Chr04: 41479350-41487859 Phaseolus vulgaris
Phvul.004G122700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 41482860-41487859 Phaseolus vulgaris
Phvul.004G122700 5.0kb downstream 5.0kb downstream 8510 true Chr04: 41474350-41482859 Phaseolus vulgaris
Phvul.004G122700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 41474350-41479349 Phaseolus vulgaris
Phvul.004G122700 10.0kb upstream 10.0kb upstream 13510 true Chr04: 41479350-41492859 Phaseolus vulgaris
Phvul.004G122700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 41482860-41492859 Phaseolus vulgaris
Phvul.004G122700 10.0kb downstream 10.0kb downstream 13510 true Chr04: 41469350-41482859 Phaseolus vulgaris
Phvul.004G122700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 41469350-41479349 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302297 5265 Fabidae View MSA
124062823 5270 Rosid View MSA
123737718 5271 Pentapetalae View MSA
122797678 5272 Eudicot View MSA
122049435 5273 Angiosperm View MSA
121345697 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.3489 0.0 133.956 High  
cufflinks 23.7858 0.0 61.7177    
cufflinks 65.5304 0.0 173.898 High High
cufflinks 37.3265 0.0 96.4903 High  
cufflinks 52.0178 0.0 135.698 High  
cufflinks 25.7027 0.0 66.5607    
cufflinks 16.8802 0.0 44.4686   Low
cufflinks 9.99115 0.0 27.3102   Low
cufflinks 33.9658 0.0 87.7989 High  
cufflinks 47.0984 0.0 122.503 High  
cufflinks 37.3302 0.0 96.5505 High  

0 Strain