Gene : Phvul.007G054800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10026//PTHR10026:SF67 - CYCLIN // SUBFAMILY NOT NAMED Genomic Order:  547
Name:  ? Phvul.007G054800 Secondary Identifier:  ? PAC:37167290
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G054800 0.5kb upstream 0.5kb upstream 7477 true Chr07: 4535527-4543003 Phaseolus vulgaris
Phvul.007G054800 0.5kb upstream 0.5kb upstream 500 false Chr07: 4535527-4536026 Phaseolus vulgaris
Phvul.007G054800 0.5kb downstream 0.5kb downstream 7477 true Chr07: 4536027-4543503 Phaseolus vulgaris
Phvul.007G054800 0.5kb downstream 0.5kb downstream 500 false Chr07: 4543004-4543503 Phaseolus vulgaris
Phvul.007G054800 1.0kb upstream 1.0kb upstream 7977 true Chr07: 4535027-4543003 Phaseolus vulgaris
Phvul.007G054800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4535027-4536026 Phaseolus vulgaris
Phvul.007G054800 1.0kb downstream 1.0kb downstream 7977 true Chr07: 4536027-4544003 Phaseolus vulgaris
Phvul.007G054800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4543004-4544003 Phaseolus vulgaris
Phvul.007G054800 2.0kb upstream 2.0kb upstream 8977 true Chr07: 4534027-4543003 Phaseolus vulgaris
Phvul.007G054800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4534027-4536026 Phaseolus vulgaris
Phvul.007G054800 2.0kb downstream 2.0kb downstream 8977 true Chr07: 4536027-4545003 Phaseolus vulgaris
Phvul.007G054800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4543004-4545003 Phaseolus vulgaris
Phvul.007G054800 5.0kb upstream 5.0kb upstream 11977 true Chr07: 4531027-4543003 Phaseolus vulgaris
Phvul.007G054800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4531027-4536026 Phaseolus vulgaris
Phvul.007G054800 5.0kb downstream 5.0kb downstream 11977 true Chr07: 4536027-4548003 Phaseolus vulgaris
Phvul.007G054800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4543004-4548003 Phaseolus vulgaris
Phvul.007G054800 10.0kb upstream 10.0kb upstream 16977 true Chr07: 4526027-4543003 Phaseolus vulgaris
Phvul.007G054800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4526027-4536026 Phaseolus vulgaris
Phvul.007G054800 10.0kb downstream 10.0kb downstream 16977 true Chr07: 4536027-4553003 Phaseolus vulgaris
Phvul.007G054800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4543004-4553003 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305222 5265 Fabidae View MSA
124070762 5270 Rosid View MSA
123742438 5271 Pentapetalae View MSA
122794565 5272 Eudicot View MSA
122048654 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121348365 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2 0.0 53.5382    
cufflinks 13.3412 0.0 45.5214   Low
cufflinks 23.1506 0.0 71.896    
cufflinks 15.4478 0.0 51.8948    
cufflinks 24.0005 0.0 75.191    
cufflinks 23.9676 0.0 75.0728    
cufflinks 26.3239 0.0 81.6619    
cufflinks 27.8921 0.0 86.7233 High  
cufflinks 25.6502 0.0 79.535    
cufflinks 36.3538 0.0 127.892 High High
cufflinks 11.2385 0.0 34.8204   Low

0 Strain