Gene : Phvul.007G043600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11266:SF18 - 22 KDA PEROXISOMAL MEMBRANE PROTEIN Genomic Order:  433
Name:  ? Phvul.007G043600 Secondary Identifier:  ? PAC:37166229
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G043600 0.5kb upstream 0.5kb upstream 4217 true Chr07: 3534822-3539038 Phaseolus vulgaris
Phvul.007G043600 0.5kb upstream 0.5kb upstream 500 false Chr07: 3534822-3535321 Phaseolus vulgaris
Phvul.007G043600 0.5kb downstream 0.5kb downstream 4217 true Chr07: 3535322-3539538 Phaseolus vulgaris
Phvul.007G043600 0.5kb downstream 0.5kb downstream 500 false Chr07: 3539039-3539538 Phaseolus vulgaris
Phvul.007G043600 1.0kb upstream 1.0kb upstream 4717 true Chr07: 3534322-3539038 Phaseolus vulgaris
Phvul.007G043600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3534322-3535321 Phaseolus vulgaris
Phvul.007G043600 1.0kb downstream 1.0kb downstream 4717 true Chr07: 3535322-3540038 Phaseolus vulgaris
Phvul.007G043600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3539039-3540038 Phaseolus vulgaris
Phvul.007G043600 2.0kb upstream 2.0kb upstream 5717 true Chr07: 3533322-3539038 Phaseolus vulgaris
Phvul.007G043600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3533322-3535321 Phaseolus vulgaris
Phvul.007G043600 2.0kb downstream 2.0kb downstream 5717 true Chr07: 3535322-3541038 Phaseolus vulgaris
Phvul.007G043600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3539039-3541038 Phaseolus vulgaris
Phvul.007G043600 5.0kb upstream 5.0kb upstream 8717 true Chr07: 3530322-3539038 Phaseolus vulgaris
Phvul.007G043600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3530322-3535321 Phaseolus vulgaris
Phvul.007G043600 5.0kb downstream 5.0kb downstream 8717 true Chr07: 3535322-3544038 Phaseolus vulgaris
Phvul.007G043600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3539039-3544038 Phaseolus vulgaris
Phvul.007G043600 10.0kb upstream 10.0kb upstream 13717 true Chr07: 3525322-3539038 Phaseolus vulgaris
Phvul.007G043600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3525322-3535321 Phaseolus vulgaris
Phvul.007G043600 10.0kb downstream 10.0kb downstream 13717 true Chr07: 3535322-3549038 Phaseolus vulgaris
Phvul.007G043600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3539039-3549038 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303210 5265 Fabidae View MSA
124061576 5270 Rosid View MSA
123751780 5271 Pentapetalae View MSA
122796884 5272 Eudicot View MSA
122051343 5273 Angiosperm View MSA
121350942 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.11721 0.0 20.8487   High
cufflinks 2.08847 0.0 7.06797    
cufflinks 1.65666 0.0 5.71276    
cufflinks 6.23821 0.0 18.6639   High
cufflinks 1.30692 0.0 4.67766    
cufflinks 1.84825 0.0 6.33139    
cufflinks 1.67657 0.0 5.83433    
cufflinks 2.97106 0.0 9.63582    
cufflinks 1.11581 0.0 4.04956    
cufflinks 1.4613 0.0 5.14893    
cufflinks 1.10919 0.0 4.03147    

0 Strain