Gene : Phvul.007G046100 P. vulgaris v2.1
Defline:  (1 of 7) K09377 - cysteine and glycine-rich protein (CSRP) Genomic Order:  458
Name:  ? Phvul.007G046100 Secondary Identifier:  ? PAC:37166588
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G046100 0.5kb upstream 0.5kb upstream 2876 true Chr07: 3743507-3746382 Phaseolus vulgaris
Phvul.007G046100 0.5kb upstream 0.5kb upstream 500 false Chr07: 3743507-3744006 Phaseolus vulgaris
Phvul.007G046100 0.5kb downstream 0.5kb downstream 2876 true Chr07: 3744007-3746882 Phaseolus vulgaris
Phvul.007G046100 0.5kb downstream 0.5kb downstream 500 false Chr07: 3746383-3746882 Phaseolus vulgaris
Phvul.007G046100 1.0kb upstream 1.0kb upstream 3376 true Chr07: 3743007-3746382 Phaseolus vulgaris
Phvul.007G046100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3743007-3744006 Phaseolus vulgaris
Phvul.007G046100 1.0kb downstream 1.0kb downstream 3376 true Chr07: 3744007-3747382 Phaseolus vulgaris
Phvul.007G046100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3746383-3747382 Phaseolus vulgaris
Phvul.007G046100 2.0kb upstream 2.0kb upstream 4376 true Chr07: 3742007-3746382 Phaseolus vulgaris
Phvul.007G046100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3742007-3744006 Phaseolus vulgaris
Phvul.007G046100 2.0kb downstream 2.0kb downstream 4376 true Chr07: 3744007-3748382 Phaseolus vulgaris
Phvul.007G046100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3746383-3748382 Phaseolus vulgaris
Phvul.007G046100 5.0kb upstream 5.0kb upstream 7376 true Chr07: 3739007-3746382 Phaseolus vulgaris
Phvul.007G046100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3739007-3744006 Phaseolus vulgaris
Phvul.007G046100 5.0kb downstream 5.0kb downstream 7376 true Chr07: 3744007-3751382 Phaseolus vulgaris
Phvul.007G046100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3746383-3751382 Phaseolus vulgaris
Phvul.007G046100 10.0kb upstream 10.0kb upstream 12376 true Chr07: 3734007-3746382 Phaseolus vulgaris
Phvul.007G046100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3734007-3744006 Phaseolus vulgaris
Phvul.007G046100 10.0kb downstream 10.0kb downstream 12376 true Chr07: 3744007-3756382 Phaseolus vulgaris
Phvul.007G046100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3746383-3756382 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312372 5265 Fabidae View MSA
124072147 5270 Rosid View MSA
123744734 5271 Pentapetalae View MSA
122789493 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.5959 0.0 143.763 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 34.0594 0.0 88.6244    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.64403 0.0 5.75014    
cufflinks 2.58925 0.0 8.58575    
cufflinks 0.212547 0.0 0.881612 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain