Gene : Phvul.004G100800 P. vulgaris v2.1
Defline:  (1 of 3) K05666 - ATP-binding cassette, subfamily C (CFTR/MRP), member 2 (ABCC2) Genomic Order:  1065
Name:  ? Phvul.004G100800 Secondary Identifier:  ? PAC:37162185
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G100800 0.5kb upstream 0.5kb upstream 6735 true Chr04: 33952756-33959490 Phaseolus vulgaris
Phvul.004G100800 0.5kb upstream 0.5kb upstream 500 false Chr04: 33952756-33953255 Phaseolus vulgaris
Phvul.004G100800 0.5kb downstream 0.5kb downstream 6735 true Chr04: 33953256-33959990 Phaseolus vulgaris
Phvul.004G100800 0.5kb downstream 0.5kb downstream 500 false Chr04: 33959491-33959990 Phaseolus vulgaris
Phvul.004G100800 1.0kb upstream 1.0kb upstream 7235 true Chr04: 33952256-33959490 Phaseolus vulgaris
Phvul.004G100800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 33952256-33953255 Phaseolus vulgaris
Phvul.004G100800 1.0kb downstream 1.0kb downstream 7235 true Chr04: 33953256-33960490 Phaseolus vulgaris
Phvul.004G100800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 33959491-33960490 Phaseolus vulgaris
Phvul.004G100800 2.0kb upstream 2.0kb upstream 8235 true Chr04: 33951256-33959490 Phaseolus vulgaris
Phvul.004G100800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 33951256-33953255 Phaseolus vulgaris
Phvul.004G100800 2.0kb downstream 2.0kb downstream 8235 true Chr04: 33953256-33961490 Phaseolus vulgaris
Phvul.004G100800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 33959491-33961490 Phaseolus vulgaris
Phvul.004G100800 5.0kb upstream 5.0kb upstream 11235 true Chr04: 33948256-33959490 Phaseolus vulgaris
Phvul.004G100800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 33948256-33953255 Phaseolus vulgaris
Phvul.004G100800 5.0kb downstream 5.0kb downstream 11235 true Chr04: 33953256-33964490 Phaseolus vulgaris
Phvul.004G100800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 33959491-33964490 Phaseolus vulgaris
Phvul.004G100800 10.0kb upstream 10.0kb upstream 16235 true Chr04: 33943256-33959490 Phaseolus vulgaris
Phvul.004G100800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 33943256-33953255 Phaseolus vulgaris
Phvul.004G100800 10.0kb downstream 10.0kb downstream 16235 true Chr04: 33953256-33969490 Phaseolus vulgaris
Phvul.004G100800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 33959491-33969490 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655830 5273 Angiosperm View MSA
122296481 5265 Fabidae View MSA
124035663 5270 Rosid View MSA
123609146 5271 Pentapetalae View MSA
122643796 5272 Eudicot View MSA
120927929 5274 Embryophyte View MSA
122968571 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.421884 0.0 1.45142 Low  
cufflinks 0.0260166 0.0 0.113393 Low Low
cufflinks 0.0965358 0.0 0.381569 Low  
cufflinks 0.113324 0.0 0.441584 Low  
cufflinks 0.0101187 0.0 0.0487872 Low Low
cufflinks 0.632939 0.0 2.08848    
cufflinks 0.607384 0.0 1.99423    
cufflinks 1.00325 0.0 3.15144   High
cufflinks 0.543066 0.0 1.81584    
cufflinks 0.067923 0.0 0.275417 Low  

0 Strain