Gene : Phvul.004G099000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Genomic Order:  1019
Name:  ? Phvul.004G099000 Secondary Identifier:  ? PAC:37163805
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G099000 0.5kb upstream 0.5kb upstream 10228 true Chr04: 30404514-30414741 Phaseolus vulgaris
Phvul.004G099000 0.5kb upstream 0.5kb upstream 500 false Chr04: 30414242-30414741 Phaseolus vulgaris
Phvul.004G099000 0.5kb downstream 0.5kb downstream 10228 true Chr04: 30404014-30414241 Phaseolus vulgaris
Phvul.004G099000 0.5kb downstream 0.5kb downstream 500 false Chr04: 30404014-30404513 Phaseolus vulgaris
Phvul.004G099000 1.0kb upstream 1.0kb upstream 10728 true Chr04: 30404514-30415241 Phaseolus vulgaris
Phvul.004G099000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 30414242-30415241 Phaseolus vulgaris
Phvul.004G099000 1.0kb downstream 1.0kb downstream 10728 true Chr04: 30403514-30414241 Phaseolus vulgaris
Phvul.004G099000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 30403514-30404513 Phaseolus vulgaris
Phvul.004G099000 2.0kb upstream 2.0kb upstream 11728 true Chr04: 30404514-30416241 Phaseolus vulgaris
Phvul.004G099000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 30414242-30416241 Phaseolus vulgaris
Phvul.004G099000 2.0kb downstream 2.0kb downstream 11728 true Chr04: 30402514-30414241 Phaseolus vulgaris
Phvul.004G099000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 30402514-30404513 Phaseolus vulgaris
Phvul.004G099000 5.0kb upstream 5.0kb upstream 14728 true Chr04: 30404514-30419241 Phaseolus vulgaris
Phvul.004G099000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 30414242-30419241 Phaseolus vulgaris
Phvul.004G099000 5.0kb downstream 5.0kb downstream 14728 true Chr04: 30399514-30414241 Phaseolus vulgaris
Phvul.004G099000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 30399514-30404513 Phaseolus vulgaris
Phvul.004G099000 10.0kb upstream 10.0kb upstream 19728 true Chr04: 30404514-30424241 Phaseolus vulgaris
Phvul.004G099000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 30414242-30424241 Phaseolus vulgaris
Phvul.004G099000 10.0kb downstream 10.0kb downstream 19728 true Chr04: 30394514-30414241 Phaseolus vulgaris
Phvul.004G099000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 30394514-30404513 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296241 5265 Fabidae View MSA
124064064 5270 Rosid View MSA
123743223 5271 Pentapetalae View MSA
122785738 5272 Eudicot View MSA
122045516 5273 Angiosperm View MSA
121310458 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.60591 0.0 7.26033   Low
cufflinks 5.669 0.0 14.8752    
cufflinks 4.36492 0.0 11.6406    
cufflinks 2.26355 0.0 6.43161   Low
cufflinks 4.41298 0.0 11.8215    
cufflinks 6.26579 0.0 16.3562    
cufflinks 8.71907 0.0 22.5525   High
cufflinks 7.82437 0.0 20.2614    
cufflinks 11.2455 0.0 29.0827   High
cufflinks 4.283 0.0 11.4549    
cufflinks 4.61167 0.0 12.2902    

0 Strain