Gene : Phvul.007G034400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15492:SF1 - CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  342
Name:  ? Phvul.007G034400 Secondary Identifier:  ? PAC:37166766
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G034400 0.5kb upstream 0.5kb upstream 3259 true Chr07: 2812689-2815947 Phaseolus vulgaris
Phvul.007G034400 0.5kb upstream 0.5kb upstream 500 false Chr07: 2815448-2815947 Phaseolus vulgaris
Phvul.007G034400 0.5kb downstream 0.5kb downstream 3259 true Chr07: 2812189-2815447 Phaseolus vulgaris
Phvul.007G034400 0.5kb downstream 0.5kb downstream 500 false Chr07: 2812189-2812688 Phaseolus vulgaris
Phvul.007G034400 1.0kb upstream 1.0kb upstream 3759 true Chr07: 2812689-2816447 Phaseolus vulgaris
Phvul.007G034400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2815448-2816447 Phaseolus vulgaris
Phvul.007G034400 1.0kb downstream 1.0kb downstream 3759 true Chr07: 2811689-2815447 Phaseolus vulgaris
Phvul.007G034400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2811689-2812688 Phaseolus vulgaris
Phvul.007G034400 2.0kb upstream 2.0kb upstream 4759 true Chr07: 2812689-2817447 Phaseolus vulgaris
Phvul.007G034400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2815448-2817447 Phaseolus vulgaris
Phvul.007G034400 2.0kb downstream 2.0kb downstream 4759 true Chr07: 2810689-2815447 Phaseolus vulgaris
Phvul.007G034400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2810689-2812688 Phaseolus vulgaris
Phvul.007G034400 5.0kb upstream 5.0kb upstream 7759 true Chr07: 2812689-2820447 Phaseolus vulgaris
Phvul.007G034400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2815448-2820447 Phaseolus vulgaris
Phvul.007G034400 5.0kb downstream 5.0kb downstream 7759 true Chr07: 2807689-2815447 Phaseolus vulgaris
Phvul.007G034400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2807689-2812688 Phaseolus vulgaris
Phvul.007G034400 10.0kb upstream 10.0kb upstream 12759 true Chr07: 2812689-2825447 Phaseolus vulgaris
Phvul.007G034400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2815448-2825447 Phaseolus vulgaris
Phvul.007G034400 10.0kb downstream 10.0kb downstream 12759 true Chr07: 2802689-2815447 Phaseolus vulgaris
Phvul.007G034400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2802689-2812688 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307481 5265 Fabidae View MSA
124062519 5270 Rosid View MSA
123740385 5271 Pentapetalae View MSA
122788529 5272 Eudicot View MSA
122041727 5273 Angiosperm View MSA
121346994 5274 Embryophyte View MSA
123425280 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.8024 0.0 19.3213    
cufflinks 7.98876 0.0 22.3413   High
cufflinks 3.49081 0.0 10.6261   Low
cufflinks 7.56654 0.0 21.3615   High
cufflinks 5.08884 0.0 14.974    
cufflinks 3.85665 0.0 11.6371   Low
cufflinks 4.98784 0.0 14.5767    
cufflinks 5.90975 0.0 16.9209    
cufflinks 5.23122 0.0 15.2556    
cufflinks 5.74496 0.0 16.6283    
cufflinks 5.71126 0.0 16.5558    

0 Strain