Gene : Phvul.007G040200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10783//PTHR10783:SF47 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  399
Name:  ? Phvul.007G040200 Secondary Identifier:  ? PAC:37164780
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G040200 0.5kb upstream 0.5kb upstream 2379 true Chr07: 3298421-3300799 Phaseolus vulgaris
Phvul.007G040200 0.5kb upstream 0.5kb upstream 500 false Chr07: 3298421-3298920 Phaseolus vulgaris
Phvul.007G040200 0.5kb downstream 0.5kb downstream 2379 true Chr07: 3298921-3301299 Phaseolus vulgaris
Phvul.007G040200 0.5kb downstream 0.5kb downstream 500 false Chr07: 3300800-3301299 Phaseolus vulgaris
Phvul.007G040200 1.0kb upstream 1.0kb upstream 2879 true Chr07: 3297921-3300799 Phaseolus vulgaris
Phvul.007G040200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3297921-3298920 Phaseolus vulgaris
Phvul.007G040200 1.0kb downstream 1.0kb downstream 2879 true Chr07: 3298921-3301799 Phaseolus vulgaris
Phvul.007G040200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3300800-3301799 Phaseolus vulgaris
Phvul.007G040200 2.0kb upstream 2.0kb upstream 3879 true Chr07: 3296921-3300799 Phaseolus vulgaris
Phvul.007G040200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3296921-3298920 Phaseolus vulgaris
Phvul.007G040200 2.0kb downstream 2.0kb downstream 3879 true Chr07: 3298921-3302799 Phaseolus vulgaris
Phvul.007G040200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3300800-3302799 Phaseolus vulgaris
Phvul.007G040200 5.0kb upstream 5.0kb upstream 6879 true Chr07: 3293921-3300799 Phaseolus vulgaris
Phvul.007G040200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3293921-3298920 Phaseolus vulgaris
Phvul.007G040200 5.0kb downstream 5.0kb downstream 6879 true Chr07: 3298921-3305799 Phaseolus vulgaris
Phvul.007G040200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3300800-3305799 Phaseolus vulgaris
Phvul.007G040200 10.0kb upstream 10.0kb upstream 11879 true Chr07: 3288921-3300799 Phaseolus vulgaris
Phvul.007G040200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3288921-3298920 Phaseolus vulgaris
Phvul.007G040200 10.0kb downstream 10.0kb downstream 11879 true Chr07: 3298921-3310799 Phaseolus vulgaris
Phvul.007G040200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3300800-3310799 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780072 5273 Angiosperm View MSA
122298419 5265 Fabidae View MSA
124072078 5270 Rosid View MSA
123744974 5271 Pentapetalae View MSA
122771322 5272 Eudicot View MSA
121351061 5274 Embryophyte View MSA
123427814 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.59435 0.0 8.3858   High
cufflinks 0.272846 0.0 1.09222 Low  
cufflinks 0.097819 0.0 0.426342 Low  
cufflinks 0.0574823 0.0 0.267014 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0374322 0.0 0.18048 Low  
cufflinks 0.0324276 0.0 0.158815 Low Low
cufflinks 0.181459 0.0 0.74663 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.39199 0.0 16.1341   High
cufflinks 0.154395 0.0 0.651075 Low  

0 Strain