Gene : Phvul.004G092300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13017 - 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED Genomic Order:  869
Name:  ? Phvul.004G092300 Secondary Identifier:  ? PAC:37162123
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G092300 0.5kb upstream 0.5kb upstream 4582 true Chr04: 18662321-18666902 Phaseolus vulgaris
Phvul.004G092300 0.5kb upstream 0.5kb upstream 500 false Chr04: 18666403-18666902 Phaseolus vulgaris
Phvul.004G092300 0.5kb downstream 0.5kb downstream 4582 true Chr04: 18661821-18666402 Phaseolus vulgaris
Phvul.004G092300 0.5kb downstream 0.5kb downstream 500 false Chr04: 18661821-18662320 Phaseolus vulgaris
Phvul.004G092300 1.0kb upstream 1.0kb upstream 5082 true Chr04: 18662321-18667402 Phaseolus vulgaris
Phvul.004G092300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 18666403-18667402 Phaseolus vulgaris
Phvul.004G092300 1.0kb downstream 1.0kb downstream 5082 true Chr04: 18661321-18666402 Phaseolus vulgaris
Phvul.004G092300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 18661321-18662320 Phaseolus vulgaris
Phvul.004G092300 2.0kb upstream 2.0kb upstream 6082 true Chr04: 18662321-18668402 Phaseolus vulgaris
Phvul.004G092300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 18666403-18668402 Phaseolus vulgaris
Phvul.004G092300 2.0kb downstream 2.0kb downstream 6082 true Chr04: 18660321-18666402 Phaseolus vulgaris
Phvul.004G092300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 18660321-18662320 Phaseolus vulgaris
Phvul.004G092300 5.0kb upstream 5.0kb upstream 9082 true Chr04: 18662321-18671402 Phaseolus vulgaris
Phvul.004G092300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 18666403-18671402 Phaseolus vulgaris
Phvul.004G092300 5.0kb downstream 5.0kb downstream 9082 true Chr04: 18657321-18666402 Phaseolus vulgaris
Phvul.004G092300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 18657321-18662320 Phaseolus vulgaris
Phvul.004G092300 10.0kb upstream 10.0kb upstream 14082 true Chr04: 18662321-18676402 Phaseolus vulgaris
Phvul.004G092300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 18666403-18676402 Phaseolus vulgaris
Phvul.004G092300 10.0kb downstream 10.0kb downstream 14082 true Chr04: 18652321-18666402 Phaseolus vulgaris
Phvul.004G092300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 18652321-18662320 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302037 5265 Fabidae View MSA
124060961 5270 Rosid View MSA
123740558 5271 Pentapetalae View MSA
122791388 5272 Eudicot View MSA
122041848 5273 Angiosperm View MSA
121347845 5274 Embryophyte View MSA
123425281 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1401 0.0 30.2312    
cufflinks 11.8204 0.0 31.9668    
cufflinks 26.6887 0.0 69.0945   High
cufflinks 10.8829 0.0 29.6157    
cufflinks 8.68857 0.0 24.1609    
cufflinks 10.5795 0.0 28.8645    
cufflinks 3.51888 0.0 10.7052   Low
cufflinks 4.17202 0.0 12.4759   Low
cufflinks 2.99796 0.0 9.30514   Low
cufflinks 13.7955 0.0 36.8666    
cufflinks 7.29918 0.0 20.6062    

0 Strain