Gene : Phvul.007G038200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF89 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  378
Name:  ? Phvul.007G038200 Secondary Identifier:  ? PAC:37165748
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G038200 0.5kb upstream 0.5kb upstream 4915 true Chr07: 3106577-3111491 Phaseolus vulgaris
Phvul.007G038200 0.5kb upstream 0.5kb upstream 500 false Chr07: 3106577-3107076 Phaseolus vulgaris
Phvul.007G038200 0.5kb downstream 0.5kb downstream 4915 true Chr07: 3107077-3111991 Phaseolus vulgaris
Phvul.007G038200 0.5kb downstream 0.5kb downstream 500 false Chr07: 3111492-3111991 Phaseolus vulgaris
Phvul.007G038200 1.0kb upstream 1.0kb upstream 5415 true Chr07: 3106077-3111491 Phaseolus vulgaris
Phvul.007G038200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3106077-3107076 Phaseolus vulgaris
Phvul.007G038200 1.0kb downstream 1.0kb downstream 5415 true Chr07: 3107077-3112491 Phaseolus vulgaris
Phvul.007G038200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3111492-3112491 Phaseolus vulgaris
Phvul.007G038200 2.0kb upstream 2.0kb upstream 6415 true Chr07: 3105077-3111491 Phaseolus vulgaris
Phvul.007G038200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3105077-3107076 Phaseolus vulgaris
Phvul.007G038200 2.0kb downstream 2.0kb downstream 6415 true Chr07: 3107077-3113491 Phaseolus vulgaris
Phvul.007G038200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3111492-3113491 Phaseolus vulgaris
Phvul.007G038200 5.0kb upstream 5.0kb upstream 9415 true Chr07: 3102077-3111491 Phaseolus vulgaris
Phvul.007G038200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3102077-3107076 Phaseolus vulgaris
Phvul.007G038200 5.0kb downstream 5.0kb downstream 9415 true Chr07: 3107077-3116491 Phaseolus vulgaris
Phvul.007G038200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3111492-3116491 Phaseolus vulgaris
Phvul.007G038200 10.0kb upstream 10.0kb upstream 14415 true Chr07: 3097077-3111491 Phaseolus vulgaris
Phvul.007G038200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3097077-3107076 Phaseolus vulgaris
Phvul.007G038200 10.0kb downstream 10.0kb downstream 14415 true Chr07: 3107077-3121491 Phaseolus vulgaris
Phvul.007G038200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3111492-3121491 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306228 5265 Fabidae View MSA
124061709 5270 Rosid View MSA
123740196 5271 Pentapetalae View MSA
122792722 5272 Eudicot View MSA
122045679 5273 Angiosperm View MSA
121347815 5274 Embryophyte View MSA
123380640 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.19124 0.0 11.6291   Low
cufflinks 6.2555 0.0 16.8387    
cufflinks 14.3242 0.0 37.0584   High
cufflinks 9.52166 0.0 24.8456    
cufflinks 7.94833 0.0 20.9829    
cufflinks 12.8085 0.0 33.1751   High
cufflinks 5.79091 0.0 15.5723    
cufflinks 4.20196 0.0 11.6563   Low
cufflinks 4.35332 0.0 11.9965   Low
cufflinks 11.9077 0.0 30.9057    
cufflinks 11.8894 0.0 30.8305    

0 Strain