Gene : Phvul.007G025800 P. vulgaris v2.1
Defline:  (1 of 3) K03456 - serine/threonine-protein phosphatase 2A regulatory subunit A (PPP2R1) Genomic Order:  255
Name:  ? Phvul.007G025800 Secondary Identifier:  ? PAC:37166846
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G025800 0.5kb upstream 0.5kb upstream 8576 true Chr07: 1924831-1933406 Phaseolus vulgaris
Phvul.007G025800 0.5kb upstream 0.5kb upstream 500 false Chr07: 1932907-1933406 Phaseolus vulgaris
Phvul.007G025800 0.5kb downstream 0.5kb downstream 8576 true Chr07: 1924331-1932906 Phaseolus vulgaris
Phvul.007G025800 0.5kb downstream 0.5kb downstream 500 false Chr07: 1924331-1924830 Phaseolus vulgaris
Phvul.007G025800 1.0kb upstream 1.0kb upstream 9076 true Chr07: 1924831-1933906 Phaseolus vulgaris
Phvul.007G025800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1932907-1933906 Phaseolus vulgaris
Phvul.007G025800 1.0kb downstream 1.0kb downstream 9076 true Chr07: 1923831-1932906 Phaseolus vulgaris
Phvul.007G025800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1923831-1924830 Phaseolus vulgaris
Phvul.007G025800 2.0kb upstream 2.0kb upstream 10076 true Chr07: 1924831-1934906 Phaseolus vulgaris
Phvul.007G025800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1932907-1934906 Phaseolus vulgaris
Phvul.007G025800 2.0kb downstream 2.0kb downstream 10076 true Chr07: 1922831-1932906 Phaseolus vulgaris
Phvul.007G025800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1922831-1924830 Phaseolus vulgaris
Phvul.007G025800 5.0kb upstream 5.0kb upstream 13076 true Chr07: 1924831-1937906 Phaseolus vulgaris
Phvul.007G025800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1932907-1937906 Phaseolus vulgaris
Phvul.007G025800 5.0kb downstream 5.0kb downstream 13076 true Chr07: 1919831-1932906 Phaseolus vulgaris
Phvul.007G025800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1919831-1924830 Phaseolus vulgaris
Phvul.007G025800 10.0kb upstream 10.0kb upstream 18076 true Chr07: 1924831-1942906 Phaseolus vulgaris
Phvul.007G025800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1932907-1942906 Phaseolus vulgaris
Phvul.007G025800 10.0kb downstream 10.0kb downstream 18076 true Chr07: 1914831-1932906 Phaseolus vulgaris
Phvul.007G025800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1914831-1924830 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300728 5265 Fabidae View MSA
124063893 5270 Rosid View MSA
123738381 5271 Pentapetalae View MSA
122789680 5272 Eudicot View MSA
122049512 5273 Angiosperm View MSA
121346959 5274 Embryophyte View MSA
123427747 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.579 0.0 96.0377   Low
cufflinks 32.6212 0.0 127.962   High
cufflinks 26.7043 0.0 95.4885    
cufflinks 31.5026 0.0 125.221    
cufflinks 28.6362 0.0 102.116    
cufflinks 31.848 0.0 115.222   High
cufflinks 30.1935 0.0 108.379 High  
cufflinks 29.1574 0.0 105.751 High  
cufflinks 30.1283 0.0 107.663    
cufflinks 26.0572 0.0 101.288   Low
cufflinks 29.2385 0.0 105.966    

0 Strain