Gene : Phvul.007G024500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10257:SF20 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 57 KDA REGULATORY SUBUNIT B' ALPHA ISOFORM-RELATED Genomic Order:  243
Name:  ? Phvul.007G024500 Secondary Identifier:  ? PAC:37167235
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G024500 0.5kb upstream 0.5kb upstream 4720 true Chr07: 1822538-1827257 Phaseolus vulgaris
Phvul.007G024500 0.5kb upstream 0.5kb upstream 500 false Chr07: 1826758-1827257 Phaseolus vulgaris
Phvul.007G024500 0.5kb downstream 0.5kb downstream 4720 true Chr07: 1822038-1826757 Phaseolus vulgaris
Phvul.007G024500 0.5kb downstream 0.5kb downstream 500 false Chr07: 1822038-1822537 Phaseolus vulgaris
Phvul.007G024500 1.0kb upstream 1.0kb upstream 5220 true Chr07: 1822538-1827757 Phaseolus vulgaris
Phvul.007G024500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1826758-1827757 Phaseolus vulgaris
Phvul.007G024500 1.0kb downstream 1.0kb downstream 5220 true Chr07: 1821538-1826757 Phaseolus vulgaris
Phvul.007G024500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1821538-1822537 Phaseolus vulgaris
Phvul.007G024500 2.0kb upstream 2.0kb upstream 6220 true Chr07: 1822538-1828757 Phaseolus vulgaris
Phvul.007G024500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1826758-1828757 Phaseolus vulgaris
Phvul.007G024500 2.0kb downstream 2.0kb downstream 6220 true Chr07: 1820538-1826757 Phaseolus vulgaris
Phvul.007G024500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1820538-1822537 Phaseolus vulgaris
Phvul.007G024500 5.0kb upstream 5.0kb upstream 9220 true Chr07: 1822538-1831757 Phaseolus vulgaris
Phvul.007G024500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1826758-1831757 Phaseolus vulgaris
Phvul.007G024500 5.0kb downstream 5.0kb downstream 9220 true Chr07: 1817538-1826757 Phaseolus vulgaris
Phvul.007G024500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1817538-1822537 Phaseolus vulgaris
Phvul.007G024500 10.0kb upstream 10.0kb upstream 14220 true Chr07: 1822538-1836757 Phaseolus vulgaris
Phvul.007G024500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1826758-1836757 Phaseolus vulgaris
Phvul.007G024500 10.0kb downstream 10.0kb downstream 14220 true Chr07: 1812538-1826757 Phaseolus vulgaris
Phvul.007G024500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1812538-1822537 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296312 5265 Fabidae View MSA
124073191 5270 Rosid View MSA
123742525 5271 Pentapetalae View MSA
122795067 5272 Eudicot View MSA
122048679 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2942 0.0 32.3846   High
cufflinks 6.27833 0.0 17.5079    
cufflinks 5.29546 0.0 15.0005    
cufflinks 20.521 0.0 53.082   High
cufflinks 8.20069 0.0 22.2846    
cufflinks 5.99635 0.0 16.7948    
cufflinks 4.17781 0.0 12.0772   Low
cufflinks 5.02951 0.0 14.29    
cufflinks 5.22508 0.0 14.7954    
cufflinks 4.93968 0.0 14.0705    
cufflinks 8.44357 0.0 22.9154    

0 Strain