Gene : Phvul.007G029900 P. vulgaris v2.1
Defline:  (1 of 14) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  297
Name:  ? Phvul.007G029900 Secondary Identifier:  ? PAC:37166830
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G029900 0.5kb upstream 0.5kb upstream 3606 true Chr07: 2392458-2396063 Phaseolus vulgaris
Phvul.007G029900 0.5kb upstream 0.5kb upstream 500 false Chr07: 2395564-2396063 Phaseolus vulgaris
Phvul.007G029900 0.5kb downstream 0.5kb downstream 3606 true Chr07: 2391958-2395563 Phaseolus vulgaris
Phvul.007G029900 0.5kb downstream 0.5kb downstream 500 false Chr07: 2391958-2392457 Phaseolus vulgaris
Phvul.007G029900 1.0kb upstream 1.0kb upstream 4106 true Chr07: 2392458-2396563 Phaseolus vulgaris
Phvul.007G029900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2395564-2396563 Phaseolus vulgaris
Phvul.007G029900 1.0kb downstream 1.0kb downstream 4106 true Chr07: 2391458-2395563 Phaseolus vulgaris
Phvul.007G029900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2391458-2392457 Phaseolus vulgaris
Phvul.007G029900 2.0kb upstream 2.0kb upstream 5106 true Chr07: 2392458-2397563 Phaseolus vulgaris
Phvul.007G029900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2395564-2397563 Phaseolus vulgaris
Phvul.007G029900 2.0kb downstream 2.0kb downstream 5106 true Chr07: 2390458-2395563 Phaseolus vulgaris
Phvul.007G029900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2390458-2392457 Phaseolus vulgaris
Phvul.007G029900 5.0kb upstream 5.0kb upstream 8106 true Chr07: 2392458-2400563 Phaseolus vulgaris
Phvul.007G029900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2395564-2400563 Phaseolus vulgaris
Phvul.007G029900 5.0kb downstream 5.0kb downstream 8106 true Chr07: 2387458-2395563 Phaseolus vulgaris
Phvul.007G029900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2387458-2392457 Phaseolus vulgaris
Phvul.007G029900 10.0kb upstream 10.0kb upstream 13106 true Chr07: 2392458-2405563 Phaseolus vulgaris
Phvul.007G029900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2395564-2405563 Phaseolus vulgaris
Phvul.007G029900 10.0kb downstream 10.0kb downstream 13106 true Chr07: 2382458-2395563 Phaseolus vulgaris
Phvul.007G029900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2382458-2392457 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302300 5265 Fabidae View MSA
124067229 5270 Rosid View MSA
123739327 5271 Pentapetalae View MSA
122785857 5272 Eudicot View MSA
122046324 5273 Angiosperm View MSA
121348254 5274 Embryophyte View MSA
123380793 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.6534 0.0 25.1686    
cufflinks 44.4505 0.0 121.096 High High
cufflinks 2.46472 0.0 7.2305   Low
cufflinks 8.87646 0.0 23.2196    
cufflinks 18.187 0.0 47.129    
cufflinks 16.9808 0.0 43.9148    
cufflinks 20.9378 0.0 54.5342    
cufflinks 27.899 0.0 73.3787 High  
cufflinks 11.1745 0.0 28.9594    
cufflinks 3.20512 0.0 9.11842   Low
cufflinks 21.8322 0.0 56.8751    

0 Strain