Gene : Phvul.007G029200 P. vulgaris v2.1
Defline:  (1 of 8) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  290
Name:  ? Phvul.007G029200 Secondary Identifier:  ? PAC:37165981
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G029200 0.5kb upstream 0.5kb upstream 2232 true Chr07: 2303358-2305589 Phaseolus vulgaris
Phvul.007G029200 0.5kb upstream 0.5kb upstream 500 false Chr07: 2305090-2305589 Phaseolus vulgaris
Phvul.007G029200 0.5kb downstream 0.5kb downstream 2232 true Chr07: 2302858-2305089 Phaseolus vulgaris
Phvul.007G029200 0.5kb downstream 0.5kb downstream 500 false Chr07: 2302858-2303357 Phaseolus vulgaris
Phvul.007G029200 1.0kb upstream 1.0kb upstream 2732 true Chr07: 2303358-2306089 Phaseolus vulgaris
Phvul.007G029200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2305090-2306089 Phaseolus vulgaris
Phvul.007G029200 1.0kb downstream 1.0kb downstream 2732 true Chr07: 2302358-2305089 Phaseolus vulgaris
Phvul.007G029200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2302358-2303357 Phaseolus vulgaris
Phvul.007G029200 2.0kb upstream 2.0kb upstream 3732 true Chr07: 2303358-2307089 Phaseolus vulgaris
Phvul.007G029200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2305090-2307089 Phaseolus vulgaris
Phvul.007G029200 2.0kb downstream 2.0kb downstream 3732 true Chr07: 2301358-2305089 Phaseolus vulgaris
Phvul.007G029200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2301358-2303357 Phaseolus vulgaris
Phvul.007G029200 5.0kb upstream 5.0kb upstream 6732 true Chr07: 2303358-2310089 Phaseolus vulgaris
Phvul.007G029200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2305090-2310089 Phaseolus vulgaris
Phvul.007G029200 5.0kb downstream 5.0kb downstream 6732 true Chr07: 2298358-2305089 Phaseolus vulgaris
Phvul.007G029200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2298358-2303357 Phaseolus vulgaris
Phvul.007G029200 10.0kb upstream 10.0kb upstream 11732 true Chr07: 2303358-2315089 Phaseolus vulgaris
Phvul.007G029200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2305090-2315089 Phaseolus vulgaris
Phvul.007G029200 10.0kb downstream 10.0kb downstream 11732 true Chr07: 2293358-2305089 Phaseolus vulgaris
Phvul.007G029200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2293358-2303357 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302966 5265 Fabidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1582 0.0 67.7641   High
cufflinks 12.4159 0.0 32.5744    
cufflinks 6.44528 0.0 17.9073    
cufflinks 22.5027 0.0 58.1743   High
cufflinks 9.53945 0.0 25.3448    
cufflinks 7.61271 0.0 20.6967    
cufflinks 5.70201 0.0 15.731   Low
cufflinks 3.92613 0.0 11.3477   Low
cufflinks 8.8872 0.0 23.6985    
cufflinks 17.1667 0.0 44.4673    
cufflinks 11.7385 0.0 30.7429    

0 Strain