Gene : Phvul.005G037000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12601:SF6 - CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG Genomic Order:  367
Name:  ? Phvul.005G037000 Secondary Identifier:  ? PAC:37152761
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G037000 0.5kb upstream 0.5kb upstream 16122 true Chr05: 3575328-3591449 Phaseolus vulgaris
Phvul.005G037000 0.5kb upstream 0.5kb upstream 500 false Chr05: 3590950-3591449 Phaseolus vulgaris
Phvul.005G037000 0.5kb downstream 0.5kb downstream 16122 true Chr05: 3574828-3590949 Phaseolus vulgaris
Phvul.005G037000 0.5kb downstream 0.5kb downstream 500 false Chr05: 3574828-3575327 Phaseolus vulgaris
Phvul.005G037000 1.0kb upstream 1.0kb upstream 16622 true Chr05: 3575328-3591949 Phaseolus vulgaris
Phvul.005G037000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3590950-3591949 Phaseolus vulgaris
Phvul.005G037000 1.0kb downstream 1.0kb downstream 16622 true Chr05: 3574328-3590949 Phaseolus vulgaris
Phvul.005G037000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3574328-3575327 Phaseolus vulgaris
Phvul.005G037000 2.0kb upstream 2.0kb upstream 17622 true Chr05: 3575328-3592949 Phaseolus vulgaris
Phvul.005G037000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3590950-3592949 Phaseolus vulgaris
Phvul.005G037000 2.0kb downstream 2.0kb downstream 17622 true Chr05: 3573328-3590949 Phaseolus vulgaris
Phvul.005G037000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3573328-3575327 Phaseolus vulgaris
Phvul.005G037000 5.0kb upstream 5.0kb upstream 20622 true Chr05: 3575328-3595949 Phaseolus vulgaris
Phvul.005G037000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3590950-3595949 Phaseolus vulgaris
Phvul.005G037000 5.0kb downstream 5.0kb downstream 20622 true Chr05: 3570328-3590949 Phaseolus vulgaris
Phvul.005G037000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3570328-3575327 Phaseolus vulgaris
Phvul.005G037000 10.0kb upstream 10.0kb upstream 25622 true Chr05: 3575328-3600949 Phaseolus vulgaris
Phvul.005G037000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3590950-3600949 Phaseolus vulgaris
Phvul.005G037000 10.0kb downstream 10.0kb downstream 25622 true Chr05: 3565328-3590949 Phaseolus vulgaris
Phvul.005G037000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3565328-3575327 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307216 5265 Fabidae View MSA
124065993 5270 Rosid View MSA
123739078 5271 Pentapetalae View MSA
122787261 5272 Eudicot View MSA
122046503 5273 Angiosperm View MSA
121349433 5274 Embryophyte View MSA
123381307 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.96596 0.0 15.4953   Low
cufflinks 17.0829 0.0 45.233    
cufflinks 22.9801 0.0 62.4666    
cufflinks 9.03639 0.0 23.3579   Low
cufflinks 17.8762 0.0 47.2814    
cufflinks 18.7901 0.0 50.1435    
cufflinks 22.6447 0.0 61.3616    
cufflinks 24.056 0.0 65.701    
cufflinks 27.8415 0.0 76.874   High
cufflinks 18.4891 0.0 49.1745    
cufflinks 12.8117 0.0 33.3354    

0 Strain