Gene : Phvul.007G180800 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24322:SF566 - GLUCOSE AND RIBITOL DEHYDROGENASE HOMOLOG 1-RELATED Genomic Order:  1669
Name:  ? Phvul.007G180800 Secondary Identifier:  ? PAC:37164111
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G180800 0.5kb upstream 0.5kb upstream 2173 true Chr07: 30108799-30110971 Phaseolus vulgaris
Phvul.007G180800 0.5kb upstream 0.5kb upstream 500 false Chr07: 30108799-30109298 Phaseolus vulgaris
Phvul.007G180800 0.5kb downstream 0.5kb downstream 2173 true Chr07: 30109299-30111471 Phaseolus vulgaris
Phvul.007G180800 0.5kb downstream 0.5kb downstream 500 false Chr07: 30110972-30111471 Phaseolus vulgaris
Phvul.007G180800 1.0kb upstream 1.0kb upstream 2673 true Chr07: 30108299-30110971 Phaseolus vulgaris
Phvul.007G180800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30108299-30109298 Phaseolus vulgaris
Phvul.007G180800 1.0kb downstream 1.0kb downstream 2673 true Chr07: 30109299-30111971 Phaseolus vulgaris
Phvul.007G180800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30110972-30111971 Phaseolus vulgaris
Phvul.007G180800 2.0kb upstream 2.0kb upstream 3673 true Chr07: 30107299-30110971 Phaseolus vulgaris
Phvul.007G180800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30107299-30109298 Phaseolus vulgaris
Phvul.007G180800 2.0kb downstream 2.0kb downstream 3673 true Chr07: 30109299-30112971 Phaseolus vulgaris
Phvul.007G180800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30110972-30112971 Phaseolus vulgaris
Phvul.007G180800 5.0kb upstream 5.0kb upstream 6673 true Chr07: 30104299-30110971 Phaseolus vulgaris
Phvul.007G180800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30104299-30109298 Phaseolus vulgaris
Phvul.007G180800 5.0kb downstream 5.0kb downstream 6673 true Chr07: 30109299-30115971 Phaseolus vulgaris
Phvul.007G180800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30110972-30115971 Phaseolus vulgaris
Phvul.007G180800 10.0kb upstream 10.0kb upstream 11673 true Chr07: 30099299-30110971 Phaseolus vulgaris
Phvul.007G180800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30099299-30109298 Phaseolus vulgaris
Phvul.007G180800 10.0kb downstream 10.0kb downstream 11673 true Chr07: 30109299-30120971 Phaseolus vulgaris
Phvul.007G180800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30110972-30120971 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315143 5265 Fabidae View MSA
124062635 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.312971 0.0 1.20739 Low  
cufflinks 1.04361 0.0 3.61171   High
cufflinks 0.638447 0.0 2.31699    
cufflinks 0.674197 0.0 2.44766    
cufflinks 0.285707 0.0 1.1133 Low  
cufflinks 0.391273 0.0 1.47961 Low  
cufflinks 0.485495 0.0 1.79987 Low  
cufflinks 0.233379 0.0 0.918667 Low  
cufflinks 0.0950652 0.0 0.401985 Low Low
cufflinks 0.940197 0.0 3.30053   High
cufflinks 0.721652 0.0 2.60088    

0 Strain