Gene : Phvul.007G179700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1658
Name:  ? Phvul.007G179700 Secondary Identifier:  ? PAC:37165882
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G179700 0.5kb upstream 0.5kb upstream 2764 true Chr07: 30028098-30030861 Phaseolus vulgaris
Phvul.007G179700 0.5kb upstream 0.5kb upstream 500 false Chr07: 30030362-30030861 Phaseolus vulgaris
Phvul.007G179700 0.5kb downstream 0.5kb downstream 2764 true Chr07: 30027598-30030361 Phaseolus vulgaris
Phvul.007G179700 0.5kb downstream 0.5kb downstream 500 false Chr07: 30027598-30028097 Phaseolus vulgaris
Phvul.007G179700 1.0kb upstream 1.0kb upstream 3264 true Chr07: 30028098-30031361 Phaseolus vulgaris
Phvul.007G179700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30030362-30031361 Phaseolus vulgaris
Phvul.007G179700 1.0kb downstream 1.0kb downstream 3264 true Chr07: 30027098-30030361 Phaseolus vulgaris
Phvul.007G179700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30027098-30028097 Phaseolus vulgaris
Phvul.007G179700 2.0kb upstream 2.0kb upstream 4264 true Chr07: 30028098-30032361 Phaseolus vulgaris
Phvul.007G179700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30030362-30032361 Phaseolus vulgaris
Phvul.007G179700 2.0kb downstream 2.0kb downstream 4264 true Chr07: 30026098-30030361 Phaseolus vulgaris
Phvul.007G179700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30026098-30028097 Phaseolus vulgaris
Phvul.007G179700 5.0kb upstream 5.0kb upstream 7264 true Chr07: 30028098-30035361 Phaseolus vulgaris
Phvul.007G179700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30030362-30035361 Phaseolus vulgaris
Phvul.007G179700 5.0kb downstream 5.0kb downstream 7264 true Chr07: 30023098-30030361 Phaseolus vulgaris
Phvul.007G179700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30023098-30028097 Phaseolus vulgaris
Phvul.007G179700 10.0kb upstream 10.0kb upstream 12264 true Chr07: 30028098-30040361 Phaseolus vulgaris
Phvul.007G179700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30030362-30040361 Phaseolus vulgaris
Phvul.007G179700 10.0kb downstream 10.0kb downstream 12264 true Chr07: 30018098-30030361 Phaseolus vulgaris
Phvul.007G179700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30018098-30028097 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301739 5265 Fabidae View MSA
124067159 5270 Rosid View MSA
123748908 5271 Pentapetalae View MSA
122796552 5272 Eudicot View MSA
122043653 5273 Angiosperm View MSA
121310161 5274 Embryophyte View MSA
123425497 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4086 0.0 60.7626   High
cufflinks 13.0025 0.0 34.9385    
cufflinks 11.3779 0.0 30.877    
cufflinks 23.2715 0.0 60.517   High
cufflinks 13.1566 0.0 35.3915    
cufflinks 11.2987 0.0 30.7179    
cufflinks 5.82475 0.0 16.8463   Low
cufflinks 5.29422 0.0 15.4237   Low
cufflinks 7.24612 0.0 20.5582    
cufflinks 16.4296 0.0 43.3932    
cufflinks 15.5384 0.0 41.2615    

0 Strain