Gene : Phvul.007G168200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Genomic Order:  1544
Name:  ? Phvul.007G168200 Secondary Identifier:  ? PAC:37163968
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G168200 0.5kb upstream 0.5kb upstream 4378 true Chr07: 28432562-28436939 Phaseolus vulgaris
Phvul.007G168200 0.5kb upstream 0.5kb upstream 500 false Chr07: 28436440-28436939 Phaseolus vulgaris
Phvul.007G168200 0.5kb downstream 0.5kb downstream 4378 true Chr07: 28432062-28436439 Phaseolus vulgaris
Phvul.007G168200 0.5kb downstream 0.5kb downstream 500 false Chr07: 28432062-28432561 Phaseolus vulgaris
Phvul.007G168200 1.0kb upstream 1.0kb upstream 4878 true Chr07: 28432562-28437439 Phaseolus vulgaris
Phvul.007G168200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28436440-28437439 Phaseolus vulgaris
Phvul.007G168200 1.0kb downstream 1.0kb downstream 4878 true Chr07: 28431562-28436439 Phaseolus vulgaris
Phvul.007G168200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28431562-28432561 Phaseolus vulgaris
Phvul.007G168200 2.0kb upstream 2.0kb upstream 5878 true Chr07: 28432562-28438439 Phaseolus vulgaris
Phvul.007G168200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28436440-28438439 Phaseolus vulgaris
Phvul.007G168200 2.0kb downstream 2.0kb downstream 5878 true Chr07: 28430562-28436439 Phaseolus vulgaris
Phvul.007G168200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28430562-28432561 Phaseolus vulgaris
Phvul.007G168200 5.0kb upstream 5.0kb upstream 8878 true Chr07: 28432562-28441439 Phaseolus vulgaris
Phvul.007G168200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28436440-28441439 Phaseolus vulgaris
Phvul.007G168200 5.0kb downstream 5.0kb downstream 8878 true Chr07: 28427562-28436439 Phaseolus vulgaris
Phvul.007G168200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28427562-28432561 Phaseolus vulgaris
Phvul.007G168200 10.0kb upstream 10.0kb upstream 13878 true Chr07: 28432562-28446439 Phaseolus vulgaris
Phvul.007G168200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28436440-28446439 Phaseolus vulgaris
Phvul.007G168200 10.0kb downstream 10.0kb downstream 13878 true Chr07: 28422562-28436439 Phaseolus vulgaris
Phvul.007G168200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28422562-28432561 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305553 5265 Fabidae View MSA
124067214 5270 Rosid View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.51976 0.0 37.8286    
cufflinks 3.21078 0.0 14.2661   Low
cufflinks 45.9481 0.0 172.664 High High
cufflinks 3.84082 0.0 16.6481   Low
cufflinks 6.38787 0.0 25.3168    
cufflinks 21.3816 0.0 77.0772   High
cufflinks 11.1127 0.0 42.5787    
cufflinks 8.9698 0.0 35.6975    
cufflinks 15.312 0.0 57.8697    
cufflinks 5.88951 0.0 22.974    
cufflinks 6.67064 0.0 25.6938    

0 Strain