Gene : Phvul.007G167600 P. vulgaris v2.1
Defline:  (1 of 3) K14493 - gibberellin receptor GID1 (GID1) Genomic Order:  1538
Name:  ? Phvul.007G167600 Secondary Identifier:  ? PAC:37166357
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6303 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G167600 0.5kb upstream 0.5kb upstream 3343 true Chr07: 28341046-28344388 Phaseolus vulgaris
Phvul.007G167600 0.5kb upstream 0.5kb upstream 500 false Chr07: 28341046-28341545 Phaseolus vulgaris
Phvul.007G167600 0.5kb downstream 0.5kb downstream 3343 true Chr07: 28341546-28344888 Phaseolus vulgaris
Phvul.007G167600 0.5kb downstream 0.5kb downstream 500 false Chr07: 28344389-28344888 Phaseolus vulgaris
Phvul.007G167600 1.0kb upstream 1.0kb upstream 3843 true Chr07: 28340546-28344388 Phaseolus vulgaris
Phvul.007G167600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28340546-28341545 Phaseolus vulgaris
Phvul.007G167600 1.0kb downstream 1.0kb downstream 3843 true Chr07: 28341546-28345388 Phaseolus vulgaris
Phvul.007G167600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28344389-28345388 Phaseolus vulgaris
Phvul.007G167600 2.0kb upstream 2.0kb upstream 4843 true Chr07: 28339546-28344388 Phaseolus vulgaris
Phvul.007G167600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28339546-28341545 Phaseolus vulgaris
Phvul.007G167600 2.0kb downstream 2.0kb downstream 4843 true Chr07: 28341546-28346388 Phaseolus vulgaris
Phvul.007G167600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28344389-28346388 Phaseolus vulgaris
Phvul.007G167600 5.0kb upstream 5.0kb upstream 7843 true Chr07: 28336546-28344388 Phaseolus vulgaris
Phvul.007G167600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28336546-28341545 Phaseolus vulgaris
Phvul.007G167600 5.0kb downstream 5.0kb downstream 7843 true Chr07: 28341546-28349388 Phaseolus vulgaris
Phvul.007G167600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28344389-28349388 Phaseolus vulgaris
Phvul.007G167600 10.0kb upstream 10.0kb upstream 12843 true Chr07: 28331546-28344388 Phaseolus vulgaris
Phvul.007G167600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28331546-28341545 Phaseolus vulgaris
Phvul.007G167600 10.0kb downstream 10.0kb downstream 12843 true Chr07: 28341546-28354388 Phaseolus vulgaris
Phvul.007G167600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28344389-28354388 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306702 5265 Fabidae View MSA
124064220 5270 Rosid View MSA
123745605 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.8853 0.0 260.897 High High
cufflinks 15.1436 0.0 39.5546   Low
cufflinks 13.9284 0.0 36.504   Low
cufflinks 38.2734 0.0 99.6593 High  
cufflinks 38.8121 0.0 101.239 High  
cufflinks 19.8619 0.0 51.4331    
cufflinks 50.1178 0.0 132.623 High  
cufflinks 36.2989 0.0 94.5845 High  
cufflinks 66.8529 0.0 180.501 High High
cufflinks 53.7567 0.0 143.095 High  
cufflinks 33.214 0.0 86.1607    

0 Strain