Gene : Phvul.005G029300 P. vulgaris v2.1
Defline:  (1 of 2) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  286
Name:  ? Phvul.005G029300 Secondary Identifier:  ? PAC:37152512
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-162 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5686 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7211 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G029300 0.5kb upstream 0.5kb upstream 5089 true Chr05: 2707640-2712728 Phaseolus vulgaris
Phvul.005G029300 0.5kb upstream 0.5kb upstream 500 false Chr05: 2707640-2708139 Phaseolus vulgaris
Phvul.005G029300 0.5kb downstream 0.5kb downstream 5089 true Chr05: 2708140-2713228 Phaseolus vulgaris
Phvul.005G029300 0.5kb downstream 0.5kb downstream 500 false Chr05: 2712729-2713228 Phaseolus vulgaris
Phvul.005G029300 1.0kb upstream 1.0kb upstream 5589 true Chr05: 2707140-2712728 Phaseolus vulgaris
Phvul.005G029300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2707140-2708139 Phaseolus vulgaris
Phvul.005G029300 1.0kb downstream 1.0kb downstream 5589 true Chr05: 2708140-2713728 Phaseolus vulgaris
Phvul.005G029300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2712729-2713728 Phaseolus vulgaris
Phvul.005G029300 2.0kb upstream 2.0kb upstream 6589 true Chr05: 2706140-2712728 Phaseolus vulgaris
Phvul.005G029300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2706140-2708139 Phaseolus vulgaris
Phvul.005G029300 2.0kb downstream 2.0kb downstream 6589 true Chr05: 2708140-2714728 Phaseolus vulgaris
Phvul.005G029300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2712729-2714728 Phaseolus vulgaris
Phvul.005G029300 5.0kb upstream 5.0kb upstream 9589 true Chr05: 2703140-2712728 Phaseolus vulgaris
Phvul.005G029300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2703140-2708139 Phaseolus vulgaris
Phvul.005G029300 5.0kb downstream 5.0kb downstream 9589 true Chr05: 2708140-2717728 Phaseolus vulgaris
Phvul.005G029300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2712729-2717728 Phaseolus vulgaris
Phvul.005G029300 10.0kb upstream 10.0kb upstream 14589 true Chr05: 2698140-2712728 Phaseolus vulgaris
Phvul.005G029300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2698140-2708139 Phaseolus vulgaris
Phvul.005G029300 10.0kb downstream 10.0kb downstream 14589 true Chr05: 2708140-2722728 Phaseolus vulgaris
Phvul.005G029300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2712729-2722728 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300659 5265 Fabidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.1334 0.0 141.294 High  
cufflinks 31.1095 0.0 100.924    
cufflinks 22.871 0.0 73.0171   Low
cufflinks 55.5226 0.0 193.7 High High
cufflinks 39.4734 0.0 129.164 High  
cufflinks 19.4874 0.0 63.7161   Low
cufflinks 30.9003 0.0 100.372 High  
cufflinks 86.452 0.0 325.774 High High
cufflinks 34.5341 0.0 113.421 High  
cufflinks 29.9537 0.0 108.472    
cufflinks 36.005 0.0 116.94 High  

0 Strain