Gene : Phvul.005G026100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  258
Name:  ? Phvul.005G026100 Secondary Identifier:  ? PAC:37154577
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G026100 0.5kb upstream 0.5kb upstream 1143 true Chr05: 2382812-2383954 Phaseolus vulgaris
Phvul.005G026100 0.5kb upstream 0.5kb upstream 500 false Chr05: 2382812-2383311 Phaseolus vulgaris
Phvul.005G026100 0.5kb downstream 0.5kb downstream 1143 true Chr05: 2383312-2384454 Phaseolus vulgaris
Phvul.005G026100 0.5kb downstream 0.5kb downstream 500 false Chr05: 2383955-2384454 Phaseolus vulgaris
Phvul.005G026100 1.0kb upstream 1.0kb upstream 1643 true Chr05: 2382312-2383954 Phaseolus vulgaris
Phvul.005G026100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2382312-2383311 Phaseolus vulgaris
Phvul.005G026100 1.0kb downstream 1.0kb downstream 1643 true Chr05: 2383312-2384954 Phaseolus vulgaris
Phvul.005G026100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2383955-2384954 Phaseolus vulgaris
Phvul.005G026100 2.0kb upstream 2.0kb upstream 2643 true Chr05: 2381312-2383954 Phaseolus vulgaris
Phvul.005G026100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2381312-2383311 Phaseolus vulgaris
Phvul.005G026100 2.0kb downstream 2.0kb downstream 2643 true Chr05: 2383312-2385954 Phaseolus vulgaris
Phvul.005G026100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2383955-2385954 Phaseolus vulgaris
Phvul.005G026100 5.0kb upstream 5.0kb upstream 5643 true Chr05: 2378312-2383954 Phaseolus vulgaris
Phvul.005G026100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2378312-2383311 Phaseolus vulgaris
Phvul.005G026100 5.0kb downstream 5.0kb downstream 5643 true Chr05: 2383312-2388954 Phaseolus vulgaris
Phvul.005G026100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2383955-2388954 Phaseolus vulgaris
Phvul.005G026100 10.0kb upstream 10.0kb upstream 10643 true Chr05: 2373312-2383954 Phaseolus vulgaris
Phvul.005G026100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2373312-2383311 Phaseolus vulgaris
Phvul.005G026100 10.0kb downstream 10.0kb downstream 10643 true Chr05: 2383312-2393954 Phaseolus vulgaris
Phvul.005G026100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2383955-2393954 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253799 5265 Fabidae View MSA
123996246 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02682 0.0 7.15432    
cufflinks 0.215891 0.0 0.922647 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.61204 0.0 5.92185    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0750211 0.0 0.355442 Low Low
cufflinks 31.8726 0.0 84.6273 High High
cufflinks 14.7447 0.0 41.6486   High
cufflinks 0.488679 0.0 1.95261 Low  
cufflinks 8.45334 0.0 25.6868    
cufflinks 0.208249 0.0 0.896242 Low  

0 Strain