Gene : Phvul.005G031400 P. vulgaris v2.1
Defline:  (1 of 2) K01527 - nascent polypeptide-associated complex subunit beta (EGD1, BTF3) Genomic Order:  308
Name:  ? Phvul.005G031400 Secondary Identifier:  ? PAC:37154601
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G031400 0.5kb upstream 0.5kb upstream 3350 true Chr05: 2908172-2911521 Phaseolus vulgaris
Phvul.005G031400 0.5kb upstream 0.5kb upstream 500 false Chr05: 2908172-2908671 Phaseolus vulgaris
Phvul.005G031400 0.5kb downstream 0.5kb downstream 3350 true Chr05: 2908672-2912021 Phaseolus vulgaris
Phvul.005G031400 0.5kb downstream 0.5kb downstream 500 false Chr05: 2911522-2912021 Phaseolus vulgaris
Phvul.005G031400 1.0kb upstream 1.0kb upstream 3850 true Chr05: 2907672-2911521 Phaseolus vulgaris
Phvul.005G031400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2907672-2908671 Phaseolus vulgaris
Phvul.005G031400 1.0kb downstream 1.0kb downstream 3850 true Chr05: 2908672-2912521 Phaseolus vulgaris
Phvul.005G031400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2911522-2912521 Phaseolus vulgaris
Phvul.005G031400 2.0kb upstream 2.0kb upstream 4850 true Chr05: 2906672-2911521 Phaseolus vulgaris
Phvul.005G031400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2906672-2908671 Phaseolus vulgaris
Phvul.005G031400 2.0kb downstream 2.0kb downstream 4850 true Chr05: 2908672-2913521 Phaseolus vulgaris
Phvul.005G031400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2911522-2913521 Phaseolus vulgaris
Phvul.005G031400 5.0kb upstream 5.0kb upstream 7850 true Chr05: 2903672-2911521 Phaseolus vulgaris
Phvul.005G031400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2903672-2908671 Phaseolus vulgaris
Phvul.005G031400 5.0kb downstream 5.0kb downstream 7850 true Chr05: 2908672-2916521 Phaseolus vulgaris
Phvul.005G031400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2911522-2916521 Phaseolus vulgaris
Phvul.005G031400 10.0kb upstream 10.0kb upstream 12850 true Chr05: 2898672-2911521 Phaseolus vulgaris
Phvul.005G031400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2898672-2908671 Phaseolus vulgaris
Phvul.005G031400 10.0kb downstream 10.0kb downstream 12850 true Chr05: 2908672-2921521 Phaseolus vulgaris
Phvul.005G031400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2911522-2921521 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312146 5265 Fabidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.3608 0.0 313.775 High High
cufflinks 85.6441 0.0 296.482 High High
cufflinks 63.3443 0.0 216.711 High  
cufflinks 92.9813 0.0 312.135 High High
cufflinks 54.4723 0.0 183.336 High  
cufflinks 45.332 0.0 162.674 High Low
cufflinks 57.5035 0.0 192.524 High  
cufflinks 66.0851 0.0 226.789 High  
cufflinks 74.2252 0.0 249.938 High  
cufflinks 49.6608 0.0 168.819 High Low
cufflinks 62.9457 0.0 210.639 High  

0 Strain