Gene : Phvul.005G031600 P. vulgaris v2.1
Defline:  (1 of 1) 1.1.1.223//1.1.1.243//1.1.1.288 - Xanthoxin dehydrogenase / Xanthoxin oxidase Genomic Order:  310
Name:  ? Phvul.005G031600 Secondary Identifier:  ? PAC:37154107
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-695 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G031600 0.5kb upstream 0.5kb upstream 2606 true Chr05: 2921874-2924479 Phaseolus vulgaris
Phvul.005G031600 0.5kb upstream 0.5kb upstream 500 false Chr05: 2921874-2922373 Phaseolus vulgaris
Phvul.005G031600 0.5kb downstream 0.5kb downstream 2606 true Chr05: 2922374-2924979 Phaseolus vulgaris
Phvul.005G031600 0.5kb downstream 0.5kb downstream 500 false Chr05: 2924480-2924979 Phaseolus vulgaris
Phvul.005G031600 1.0kb upstream 1.0kb upstream 3106 true Chr05: 2921374-2924479 Phaseolus vulgaris
Phvul.005G031600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2921374-2922373 Phaseolus vulgaris
Phvul.005G031600 1.0kb downstream 1.0kb downstream 3106 true Chr05: 2922374-2925479 Phaseolus vulgaris
Phvul.005G031600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2924480-2925479 Phaseolus vulgaris
Phvul.005G031600 2.0kb upstream 2.0kb upstream 4106 true Chr05: 2920374-2924479 Phaseolus vulgaris
Phvul.005G031600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2920374-2922373 Phaseolus vulgaris
Phvul.005G031600 2.0kb downstream 2.0kb downstream 4106 true Chr05: 2922374-2926479 Phaseolus vulgaris
Phvul.005G031600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2924480-2926479 Phaseolus vulgaris
Phvul.005G031600 5.0kb upstream 5.0kb upstream 7106 true Chr05: 2917374-2924479 Phaseolus vulgaris
Phvul.005G031600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2917374-2922373 Phaseolus vulgaris
Phvul.005G031600 5.0kb downstream 5.0kb downstream 7106 true Chr05: 2922374-2929479 Phaseolus vulgaris
Phvul.005G031600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2924480-2929479 Phaseolus vulgaris
Phvul.005G031600 10.0kb upstream 10.0kb upstream 12106 true Chr05: 2912374-2924479 Phaseolus vulgaris
Phvul.005G031600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2912374-2922373 Phaseolus vulgaris
Phvul.005G031600 10.0kb downstream 10.0kb downstream 12106 true Chr05: 2922374-2934479 Phaseolus vulgaris
Phvul.005G031600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2924480-2934479 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299815 5265 Fabidae View MSA
124070335 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9971 0.0 45.7021    
cufflinks 3.54381 0.0 11.1863    
cufflinks 29.9502 0.0 77.7658   High
cufflinks 13.7247 0.0 37.8898    
cufflinks 13.9166 0.0 38.2666    
cufflinks 16.962 0.0 45.5506    
cufflinks 3.22531 0.0 10.3001   Low
cufflinks 2.4182 0.0 7.95872   Low
cufflinks 2.74487 0.0 8.93519   Low
cufflinks 6.19987 0.0 18.4324    
cufflinks 9.91706 0.0 28.0393    

0 Strain