Gene : Phvul.005G016300 P. vulgaris v2.1
Defline:  (1 of 5) PF03760 - Late embryogenesis abundant (LEA) group 1 (LEA_1) Genomic Order:  158
Name:  ? Phvul.005G016300 Secondary Identifier:  ? PAC:37153218
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G016300 0.5kb upstream 0.5kb upstream 1829 true Chr05: 1433507-1435335 Phaseolus vulgaris
Phvul.005G016300 0.5kb upstream 0.5kb upstream 500 false Chr05: 1433507-1434006 Phaseolus vulgaris
Phvul.005G016300 0.5kb downstream 0.5kb downstream 1829 true Chr05: 1434007-1435835 Phaseolus vulgaris
Phvul.005G016300 0.5kb downstream 0.5kb downstream 500 false Chr05: 1435336-1435835 Phaseolus vulgaris
Phvul.005G016300 1.0kb upstream 1.0kb upstream 2329 true Chr05: 1433007-1435335 Phaseolus vulgaris
Phvul.005G016300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1433007-1434006 Phaseolus vulgaris
Phvul.005G016300 1.0kb downstream 1.0kb downstream 2329 true Chr05: 1434007-1436335 Phaseolus vulgaris
Phvul.005G016300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1435336-1436335 Phaseolus vulgaris
Phvul.005G016300 2.0kb upstream 2.0kb upstream 3329 true Chr05: 1432007-1435335 Phaseolus vulgaris
Phvul.005G016300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1432007-1434006 Phaseolus vulgaris
Phvul.005G016300 2.0kb downstream 2.0kb downstream 3329 true Chr05: 1434007-1437335 Phaseolus vulgaris
Phvul.005G016300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1435336-1437335 Phaseolus vulgaris
Phvul.005G016300 5.0kb upstream 5.0kb upstream 6329 true Chr05: 1429007-1435335 Phaseolus vulgaris
Phvul.005G016300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1429007-1434006 Phaseolus vulgaris
Phvul.005G016300 5.0kb downstream 5.0kb downstream 6329 true Chr05: 1434007-1440335 Phaseolus vulgaris
Phvul.005G016300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1435336-1440335 Phaseolus vulgaris
Phvul.005G016300 10.0kb upstream 10.0kb upstream 11329 true Chr05: 1424007-1435335 Phaseolus vulgaris
Phvul.005G016300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1424007-1434006 Phaseolus vulgaris
Phvul.005G016300 10.0kb downstream 10.0kb downstream 11329 true Chr05: 1434007-1445335 Phaseolus vulgaris
Phvul.005G016300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1435336-1445335 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041492 5273 Angiosperm View MSA
122300606 5265 Fabidae View MSA
124069755 5270 Rosid View MSA
123747649 5271 Pentapetalae View MSA
122796775 5272 Eudicot View MSA
121309859 5274 Embryophyte View MSA
123347503 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.554567 0.0 2.38464    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.2192 0.0 30.7704    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain