Gene : Phvul.005G018400 P. vulgaris v2.1
Genomic Order:  180 Name:  ? Phvul.005G018400
Secondary Identifier:  ? PAC:37152649
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G018400 0.5kb upstream 0.5kb upstream 2905 true Chr05: 1577169-1580073 Phaseolus vulgaris
Phvul.005G018400 0.5kb upstream 0.5kb upstream 500 false Chr05: 1577169-1577668 Phaseolus vulgaris
Phvul.005G018400 0.5kb downstream 0.5kb downstream 2905 true Chr05: 1577669-1580573 Phaseolus vulgaris
Phvul.005G018400 0.5kb downstream 0.5kb downstream 500 false Chr05: 1580074-1580573 Phaseolus vulgaris
Phvul.005G018400 1.0kb upstream 1.0kb upstream 3405 true Chr05: 1576669-1580073 Phaseolus vulgaris
Phvul.005G018400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1576669-1577668 Phaseolus vulgaris
Phvul.005G018400 1.0kb downstream 1.0kb downstream 3405 true Chr05: 1577669-1581073 Phaseolus vulgaris
Phvul.005G018400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1580074-1581073 Phaseolus vulgaris
Phvul.005G018400 2.0kb upstream 2.0kb upstream 4405 true Chr05: 1575669-1580073 Phaseolus vulgaris
Phvul.005G018400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1575669-1577668 Phaseolus vulgaris
Phvul.005G018400 2.0kb downstream 2.0kb downstream 4405 true Chr05: 1577669-1582073 Phaseolus vulgaris
Phvul.005G018400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1580074-1582073 Phaseolus vulgaris
Phvul.005G018400 5.0kb upstream 5.0kb upstream 7405 true Chr05: 1572669-1580073 Phaseolus vulgaris
Phvul.005G018400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1572669-1577668 Phaseolus vulgaris
Phvul.005G018400 5.0kb downstream 5.0kb downstream 7405 true Chr05: 1577669-1585073 Phaseolus vulgaris
Phvul.005G018400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1580074-1585073 Phaseolus vulgaris
Phvul.005G018400 10.0kb upstream 10.0kb upstream 12405 true Chr05: 1567669-1580073 Phaseolus vulgaris
Phvul.005G018400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1567669-1577668 Phaseolus vulgaris
Phvul.005G018400 10.0kb downstream 10.0kb downstream 12405 true Chr05: 1577669-1590073 Phaseolus vulgaris
Phvul.005G018400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1580074-1590073 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312764 5265 Fabidae View MSA
124050526 5270 Rosid View MSA
123743609 5271 Pentapetalae View MSA
122795780 5272 Eudicot View MSA
122044471 5273 Angiosperm View MSA
121351631 5274 Embryophyte View MSA
123382253 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.54563 0.0 23.1783   High
cufflinks 4.8123 0.0 21.0302    
cufflinks 3.56564 0.0 15.8144    
cufflinks 6.74262 0.0 26.847   High
cufflinks 3.99869 0.0 17.6385    
cufflinks 3.97264 0.0 16.9919    
cufflinks 2.26471 0.0 10.4131   Low
cufflinks 3.50601 0.0 15.7733    
cufflinks 2.90949 0.0 13.6088   Low
cufflinks 3.80125 0.0 16.9169    
cufflinks 3.84596 0.0 16.472    

0 Strain