Gene : Phvul.007G165200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Genomic Order:  1512
Name:  ? Phvul.007G165200 Secondary Identifier:  ? PAC:37165060
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G165200 0.5kb upstream 0.5kb upstream 4871 true Chr07: 27912536-27917406 Phaseolus vulgaris
Phvul.007G165200 0.5kb upstream 0.5kb upstream 500 false Chr07: 27912536-27913035 Phaseolus vulgaris
Phvul.007G165200 0.5kb downstream 0.5kb downstream 4871 true Chr07: 27913036-27917906 Phaseolus vulgaris
Phvul.007G165200 0.5kb downstream 0.5kb downstream 500 false Chr07: 27917407-27917906 Phaseolus vulgaris
Phvul.007G165200 1.0kb upstream 1.0kb upstream 5371 true Chr07: 27912036-27917406 Phaseolus vulgaris
Phvul.007G165200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27912036-27913035 Phaseolus vulgaris
Phvul.007G165200 1.0kb downstream 1.0kb downstream 5371 true Chr07: 27913036-27918406 Phaseolus vulgaris
Phvul.007G165200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27917407-27918406 Phaseolus vulgaris
Phvul.007G165200 2.0kb upstream 2.0kb upstream 6371 true Chr07: 27911036-27917406 Phaseolus vulgaris
Phvul.007G165200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27911036-27913035 Phaseolus vulgaris
Phvul.007G165200 2.0kb downstream 2.0kb downstream 6371 true Chr07: 27913036-27919406 Phaseolus vulgaris
Phvul.007G165200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27917407-27919406 Phaseolus vulgaris
Phvul.007G165200 5.0kb upstream 5.0kb upstream 9371 true Chr07: 27908036-27917406 Phaseolus vulgaris
Phvul.007G165200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27908036-27913035 Phaseolus vulgaris
Phvul.007G165200 5.0kb downstream 5.0kb downstream 9371 true Chr07: 27913036-27922406 Phaseolus vulgaris
Phvul.007G165200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27917407-27922406 Phaseolus vulgaris
Phvul.007G165200 10.0kb upstream 10.0kb upstream 14371 true Chr07: 27903036-27917406 Phaseolus vulgaris
Phvul.007G165200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27903036-27913035 Phaseolus vulgaris
Phvul.007G165200 10.0kb downstream 10.0kb downstream 14371 true Chr07: 27913036-27927406 Phaseolus vulgaris
Phvul.007G165200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27917407-27927406 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300855 5265 Fabidae View MSA
124067550 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2569 0.0 57.3704    
cufflinks 17.5563 0.0 69.115    
cufflinks 14.8246 0.0 59.7321    
cufflinks 19.8791 0.0 77.7786    
cufflinks 25.5229 0.0 100.965   High
cufflinks 15.894 0.0 58.4458    
cufflinks 14.2238 0.0 55.911    
cufflinks 10.7356 0.0 44.0062   Low
cufflinks 15.5302 0.0 56.2819    
cufflinks 19.2686 0.0 75.044    
cufflinks 25.0673 0.0 97.4748   High

0 Strain