Gene : Phvul.007G165800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10168:SF118 - GLUTAREDOXIN-C11-RELATED Genomic Order:  1520
Name:  ? Phvul.007G165800 Secondary Identifier:  ? PAC:37166167
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G165800 0.5kb upstream 0.5kb upstream 1779 true Chr07: 28050359-28052137 Phaseolus vulgaris
Phvul.007G165800 0.5kb upstream 0.5kb upstream 500 false Chr07: 28050359-28050858 Phaseolus vulgaris
Phvul.007G165800 0.5kb downstream 0.5kb downstream 1779 true Chr07: 28050859-28052637 Phaseolus vulgaris
Phvul.007G165800 0.5kb downstream 0.5kb downstream 500 false Chr07: 28052138-28052637 Phaseolus vulgaris
Phvul.007G165800 1.0kb upstream 1.0kb upstream 2279 true Chr07: 28049859-28052137 Phaseolus vulgaris
Phvul.007G165800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28049859-28050858 Phaseolus vulgaris
Phvul.007G165800 1.0kb downstream 1.0kb downstream 2279 true Chr07: 28050859-28053137 Phaseolus vulgaris
Phvul.007G165800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28052138-28053137 Phaseolus vulgaris
Phvul.007G165800 2.0kb upstream 2.0kb upstream 3279 true Chr07: 28048859-28052137 Phaseolus vulgaris
Phvul.007G165800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28048859-28050858 Phaseolus vulgaris
Phvul.007G165800 2.0kb downstream 2.0kb downstream 3279 true Chr07: 28050859-28054137 Phaseolus vulgaris
Phvul.007G165800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28052138-28054137 Phaseolus vulgaris
Phvul.007G165800 5.0kb upstream 5.0kb upstream 6279 true Chr07: 28045859-28052137 Phaseolus vulgaris
Phvul.007G165800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28045859-28050858 Phaseolus vulgaris
Phvul.007G165800 5.0kb downstream 5.0kb downstream 6279 true Chr07: 28050859-28057137 Phaseolus vulgaris
Phvul.007G165800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28052138-28057137 Phaseolus vulgaris
Phvul.007G165800 10.0kb upstream 10.0kb upstream 11279 true Chr07: 28040859-28052137 Phaseolus vulgaris
Phvul.007G165800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28040859-28050858 Phaseolus vulgaris
Phvul.007G165800 10.0kb downstream 10.0kb downstream 11279 true Chr07: 28050859-28062137 Phaseolus vulgaris
Phvul.007G165800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28052138-28062137 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315072 5265 Fabidae View MSA
124063697 5270 Rosid View MSA
123752852 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.29352 0.0 13.6883   High
cufflinks 0.579832 0.0 2.24907    
cufflinks 4.86078 0.0 15.2075   High
cufflinks 0.480397 0.0 1.89883 Low  
cufflinks 3.23042 0.0 10.7292    
cufflinks 0.210148 0.0 0.883307 Low Low
cufflinks 0.229666 0.0 0.958748 Low Low
cufflinks 0.0987945 0.0 0.444961 Low Low
cufflinks 1.12427 0.0 4.14102    
cufflinks 6.00267 0.0 18.4751   High
cufflinks 1.53393 0.0 5.51351    

0 Strain