Gene : Phvul.007G165900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10168:SF57 - GLUTAREDOXIN-C13-RELATED Genomic Order:  1521
Name:  ? Phvul.007G165900 Secondary Identifier:  ? PAC:37167580
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G165900 0.5kb upstream 0.5kb upstream 1191 true Chr07: 28075392-28076582 Phaseolus vulgaris
Phvul.007G165900 0.5kb upstream 0.5kb upstream 500 false Chr07: 28075392-28075891 Phaseolus vulgaris
Phvul.007G165900 0.5kb downstream 0.5kb downstream 1191 true Chr07: 28075892-28077082 Phaseolus vulgaris
Phvul.007G165900 0.5kb downstream 0.5kb downstream 500 false Chr07: 28076583-28077082 Phaseolus vulgaris
Phvul.007G165900 1.0kb upstream 1.0kb upstream 1691 true Chr07: 28074892-28076582 Phaseolus vulgaris
Phvul.007G165900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28074892-28075891 Phaseolus vulgaris
Phvul.007G165900 1.0kb downstream 1.0kb downstream 1691 true Chr07: 28075892-28077582 Phaseolus vulgaris
Phvul.007G165900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28076583-28077582 Phaseolus vulgaris
Phvul.007G165900 2.0kb upstream 2.0kb upstream 2691 true Chr07: 28073892-28076582 Phaseolus vulgaris
Phvul.007G165900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28073892-28075891 Phaseolus vulgaris
Phvul.007G165900 2.0kb downstream 2.0kb downstream 2691 true Chr07: 28075892-28078582 Phaseolus vulgaris
Phvul.007G165900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28076583-28078582 Phaseolus vulgaris
Phvul.007G165900 5.0kb upstream 5.0kb upstream 5691 true Chr07: 28070892-28076582 Phaseolus vulgaris
Phvul.007G165900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28070892-28075891 Phaseolus vulgaris
Phvul.007G165900 5.0kb downstream 5.0kb downstream 5691 true Chr07: 28075892-28081582 Phaseolus vulgaris
Phvul.007G165900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28076583-28081582 Phaseolus vulgaris
Phvul.007G165900 10.0kb upstream 10.0kb upstream 10691 true Chr07: 28065892-28076582 Phaseolus vulgaris
Phvul.007G165900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28065892-28075891 Phaseolus vulgaris
Phvul.007G165900 10.0kb downstream 10.0kb downstream 10691 true Chr07: 28075892-28086582 Phaseolus vulgaris
Phvul.007G165900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28076583-28086582 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122310435 5265 Fabidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.388864 0.0 1.61305 Low  
cufflinks 0.484132 0.0 1.97258 Low  
cufflinks 8.90561 0.0 27.4438   High
cufflinks 0.120574 0.0 0.560082 Low Low
cufflinks 5.45609 0.0 17.8987    
cufflinks 1.73485 0.0 6.37806    
cufflinks 2.89377 0.0 10.1212    
cufflinks 1.73368 0.0 6.36769    
cufflinks 0.156121 0.0 0.705431 Low Low
cufflinks 1.82105 0.0 6.68451    
cufflinks 35.2705 0.0 95.0463 High High

0 Strain